Helianthus annuus (common sunflower): 110941615
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Entry
110941615 CDS
T05101
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110941615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110941615
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110941615
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
ATG17_like
DUF2465
H-kinase_dim
Motif
Other DBs
NCBI-GeneID:
110941615
NCBI-ProteinID:
XP_022038966
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All DBs
Position
5:143124068..143130930
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AA seq
935 aa
AA seq
DB search
MDADLQDHNKLPDLKLDAKQAQGFLTFFKKLPNDAKAVRFFDRRDYFTAHGENASFIANT
YYHTTTVLKQIGNGPDALSSVSVSKNMFETIVRDLLLERTDHSLELYEGSGSNWRLTKRG
TPGNLNSFEDILFAKNDMQDSPAIVAIIPNFRETGCTVGLGYVDLSKRVLGITEFLDDNH
FTNVESALVSLGCKECVLPTEITKSSECKPLYDVMSKCGVMVTERKKAEFKGRDLTQDLG
RLIKGSNEPVRDLVSSFEHAPMALGALLSYAELLSDENNYGNYTIGWYNLNSYMRLDSAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGRRLLHMWLKQPLLDVNEINTRLDLVQAF
VDDTAFRQDLRQHLKRIHDIERLMRCVEKRRDSLLHIVKLYQSSIRIPYIKSAMERYDGQ
FVSLIKERFMDRFDYLTNDDHLNKFIGLVEVSVDLDQLENGEYMISPGYDSQLSDLKNEQ
ESVEQQIHDLHQKTANDLELAIDKLKMDKGTQFGHVFRITKKEEPKVRKKLNTHFIILET
RKDGVKFTNTKLKKLGDQYQKVLEEYKSCQKELVARVVNTASTFSEVFDDLAKLLSELDV
LLSFADLAASSPTPYTRPDITPSDTGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWF
QIITGPNMGGKSTFIRQIGVNILMAQVGSFVPCDKATISIRDCIFARVGAGDCQLRGVST
FMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHF
HELTALAHENSGQPSGIANYHVSAHIDSSSRKLTMLYKVEAGACDQSFGIHVAEFANFPE
SVVSLAREKAAELEDFTPVSIVSNEAEQEAGRKRKKPSEPDDMAIGAPRARKFLKDFSEL
PLDKMDLKQALQEVKRLKNELQDDVGNCKWLQQFI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatttacaggatcacaacaagctacctgacctcaaattagatgctaaacaa
gctcaagggtttctcaccttcttcaagaaattacccaatgatgcgaaagccgttcgcttt
ttcgatcgacgggattacttcacagctcatggtgagaatgcttcatttattgcaaataca
tattatcacaccacaacagtcttgaaacaaattggtaatgggcccgatgctttatctagt
gtgagtgtaagcaaaaacatgttcgaaactatcgttcgcgatcttttactagaaagaacc
gatcatagtcttgaattatacgagggcagcgggtcaaactggcgattaacaaaacgagga
acccctggtaatctcaacagcttcgaagacattttatttgcaaaaaacgatatgcaagat
tcaccagcaatcgtagccattattccaaattttcgcgaaaccgggtgcaccgttggatta
ggttatgtcgatctttctaaacgggtacttggcattaccgagtttctcgatgataaccac
tttacgaacgttgaatcggctttagtttctctcgggtgcaaagagtgtgttttacctact
gaaatcacgaaatcgagtgagtgtaaacctttgtatgatgtaatgtcgaaatgtggtgtg
atggtaaccgaaagaaagaaagccgagtttaaaggacgagatttaacgcaagatcttggt
aggttaatcaaaggttcaaatgaaccggttcgtgatctcgtttcttctttcgaacatgca
cctatggctttaggggcgttattgtcttacgctgagttactttccgatgaaaacaattac
gggaattatacgatcggttggtataatcttaacagttacatgagattagactctgctgct
atgagggcgttgaatgttatggagagtaaaacggatgctaacaagaattttagtctgttt
ggtctcatgaatagaacatgcacagctggaatgggtcgaaggttactacacatgtggcta
aaacaacctttgttggatgtcaacgagattaatacaagactagatttggtgcaagcgttt
gttgacgataccgcttttcgtcaggatttacgtcagcatttgaaaagaatacacgacatt
gaacggttgatgcgctgtgttgagaaacgaagagatagtttgttacatatcgtcaagctt
tatcagtcgagcattagaattccatacattaaaagcgcaatggaacgatacgatggtcaa
tttgtatcactaatcaaggaaagattcatggatcgtttcgattatctgactaacgatgat
cacttgaataagtttattggtctcgttgaagtttctgttgaccttgaccaactcgaaaac
ggagaatacatgatttcaccgggttacgattctcagttatcagacctgaaaaacgagcaa
gaatcagtagaacaacaaatacacgatttgcatcaaaaaaccgccaatgatctcgagcta
gctatcgacaagttaaagatggataagggtactcagttcggacacgtttttagaatcaca
aagaaagaagaaccaaaagtacggaagaagcttaacacccattttatcattctcgaaacc
cgaaaagacggtgtaaaatttacaaatactaagctgaagaaattaggagatcagtaccag
aaggttctagaagaatataaaagctgtcagaaggagcttgtagctagagttgtcaataca
gcatcaactttctctgaagtgtttgacgatttggctaagttgctctccgagctggacgtc
ttgcttagttttgctgacctggctgctagcagccccaccccgtatacgagacccgatatc
acaccatcggatacgggagatatcatattggaaggaagtagacacccttgtgtggaagct
caagattgggtgaattttataccaaacgactgcaaacttgtgaggggagagagttggttt
caaattatcaccgggcctaacatgggtggaaaatccacatttatacgccagattggtgtg
aacattcttatggcgcaagtgggctcttttgttccttgtgacaaagcaaccatttctatt
cgtgactgtatttttgcacgtgttggtgctggtgactgtcagttacgtggagtttccacc
tttatgcaagaaatgcttgagacagcatcaattctaaaaggcgccactgataaatcattg
attattattgatgaattgggccgtggaacatcaacttatgatggatttggtttagcgtgg
gctatatgtgagcacttggttgaagtaattaaagcgcctactttattcgccactcatttc
catgagttgactgcattagctcatgaaaattctggtcaaccgtccggtatagcaaattat
catgtcagtgcacacattgactcctcaagccggaagctaacaatgctttacaaggttgaa
gcaggggcttgtgatcagagttttggaattcatgttgcagagtttgcaaactttcctgaa
agtgtcgtgtctcttgctagagaaaaagctgctgagctggaggacttcacacccgtttca
attgtatcaaacgaggctgaacaagaggctggccggaaacggaagaagccatctgaacca
gatgatatggccataggtgctcctcgggcccgcaagttcttaaaggacttctcggaattg
ccacttgacaaaatggacttgaagcaggctttgcaagaagtgaaacggttaaagaacgag
ctgcaggatgatgttggcaactgtaaatggctccagcagttcatataa
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