Helianthus annuus (common sunflower): 110941907
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Entry
110941907 CDS
T05101
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
han03400
]
110941907
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110941907
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110941907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
DEXQc_Suv3
AAA_19
Helicase_PWI
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
110941907
NCBI-ProteinID:
XP_022039291
LinkDB
All DBs
Position
5:complement(167175893..167189896)
Genome browser
AA seq
2082 aa
AA seq
DB search
MLLELPRLTNSLREPFDADQAYLNRKSLLQSLTNRRSSAKPVDEFEVARLIVHRWDEASI
EVRQAYRQFVGAVVDLIDGVVINEEFKEAALAVYKLFGTREEVEEDKHKFIEKKSELQKL
LGYAVSDAKLQKVVNAVQSLSFLQPDNHESKSLLERQVNGNDDGQEFGANLVFHHPTRFL
VDASFDDREMWGEGTNVTSTSLHGGWYDHSENTNKVFDLEWLRDECSRIVNGSASQLPQD
ELAMAICRVLESDKAGDEIAGDLLDLVGDSAFQTVQDLITHRKELVDAIHHGMLNLKSEK
SVSSSQPRMPSYGTQVTVQTESEKQFDKLRRKEEKKHKRGADNEFDNDLSLTSFSSLLHA
SAKKSPFDDLIGLGEGPNTIAATALPQGTTRKHHKGYEEVTIPPTQTAPMKPGEKLIEIK
ELDEFAQAAFQGYKTLNRIQSRIFQTTYHTNENILVCAPTGAGKTNIAMIAVLHEIGQHF
KDGYLHKDEFKIVYVAPMKALAAEVTKAFSHRLAPLNMVVRELTGDMQLSKTELEETQMI
VTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQSMI
RIVGLSATLPNYLEVAQFLRVSPDAGLFFFDSSYRPVPLAQQYIGITEPNFQARNELLNE
VCYKKVVESLKQGHQAMVFVHSRKDTGKTADKLIELARKYNELDLFMNEEHPQFHLVKME
VAKSRNKQLVQLFGSGVGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHT
VVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTS
QLPIESQFISSLKDNLNAEVTLGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWDEVIA
DPSLGMKQRSLVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVETYNEML
RRHMSDSEIIDMVAHSSEFENIVVREEEQNELETLLRTVCPLEVKGGPTNKHGKVSILIQ
LYISRGSIDAFSLISDAAYISASLARIMRALFEICLRRGWCEMTSFMLEYCKAVDRQIWP
HQHPLRQFDRDISQEILRKLEEQEIDLDHLQEMKEKEIGAMIRYAPGGRVVKQYLGFFPS
IILSATISPITRTVLKVDLVITPDFVWKDRWHGAAQRWWILVEDSDNDHLYHSELFTLTK
RAAKGDPQKLSFTVPIFEPHPPQYYIRAVSDSWLQAEAFYTISFKNLALPESHTTHTELL
DLKPLPVTALGNKAYENLYRFSHFNPIQTQAFHVLYHTQNNILLGAPTGSGKTISAELAM
LHLFNSAPDMKVIYIAPLKAIVRERMNDWKNGLVTKLGKKMVEMTGDYTPDMMALMSADI
IISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERP
VRFVGLSTALANAQNLADWLGVDEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNK
PTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPVQFLAMPEDALQMILSQV
TDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIK
GTEYYDGKAKRYIDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPV
ESSLRDQLHDHINAEIVSGTISHKQDAVHYLTWTYLFRRLMVNPAYYGLEDCDPESLSSY
LSSLVQNTFEDLEDGGCIKMDEENVEPLMLGSIASQYYLKYMTISMFASNIGPDTSLEVF
LNVLSAASEYDELPVRHNEENYNEALSAKVPLAVDKNRLDDPHVKTNLLFQAHFSQVELP
ISDYYTDLKSVLDQSIRIIQAMIDVCANSGWLSSSITCMHLLQMVMQGMWFEKDSPLWML
PCMTEDLVISLQKGGVSNIQQLLNLPNTNMQSRFGNIASRLQQDLQHFPRIQVKLKIEGR
DVDSDNKPSLSIRLEKFNRRKTSRAFTPRFPKLKDEAWWLVLGNTSTSELHALKRISFTD
RLVTRMKLPSTTTSFQGMKLLLVSDCYLGFDQEYSIEELMES
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggaactgccgcgattaactaactctctccgggagccattcgacgccgatcaa
gcttatctcaaccgtaaatctcttcttcaatcgctcaccaatcgccgcagctcggcgaaa
cctgttgacgaattcgaagttgctcgactgattgttcatcgatgggatgaagcttctatt
gaagtccgccaagcatacaggcaatttgttggggcggtggttgatttgatcgatggggtg
gtgatcaatgaggagttcaaagaggcagcgttggcagtatataagctttttggtactcgt
gaagaggtggaagaagataaacataagttcattgagaagaaatctgaactgcaaaaacta
cttggctatgctgtttcggatgcaaagttacagaaagttgttaatgccgttcagagtctt
tcttttttgcagccagacaaccacgagtcaaagtctttacttgaaaggcaagtaaacggg
aatgatgatggccaagaatttggtgcaaatttggtttttcaccacccaacccggttcttg
gttgatgcttcttttgacgatcgagaaatgtggggggagggtacaaatgtaacttctacc
tcactccatggagggtggtatgatcatagtgagaacacaaataaagtatttgatttagaa
tggttaagagatgaatgcagtagaatagtaaatggtagtgcttctcagcttcctcaagat
gaactagcaatggctatatgtcgggtacttgaatcagacaaagctggtgatgagatagct
ggtgatttgttggatttagttggtgatagtgcatttcaaactgttcaagaccttatcacg
cataggaaggaacttgttgatgccattcatcatgggatgcttaacttaaaatctgaaaag
tcggtttctagctctcaaccgcgtatgcctagctatggtactcaggttactgttcaaaca
gaatcagaaaagcaatttgataaattaagacgcaaagaggagaagaaacataagcgtgga
gcagataacgagtttgacaatgacttgtctcttacaagttttagttctttacttcatgca
agtgcaaagaaaagcccatttgatgatctgattgggcttggtgaagggcccaacacaata
gcagctactgctcttcctcagggaactactaggaaacatcataagggatatgaagaagtt
accatcccacccacacagaccgcacccatgaagcctggagagaagctgattgaaataaag
gagttggatgaatttgcacaagctgctttccaaggctacaagacactcaaccgtattcag
agcagaatattccaaactacttaccatactaatgaaaatattctggtttgtgctccaaca
ggagctggcaaaacaaatatagctatgattgctgttctacatgagattggacagcacttt
aaagacggttacttgcataaagatgagtttaagatagtttatgttgctccaatgaaggca
ttagctgctgaggttactaaggcatttagccatcgattagctccattgaacatggttgtg
agagaactaaccggtgacatgcagctttctaaaactgaacttgaagaaactcagatgatt
gtaacaacacctgagaagtgggatgtaatcacccgtaaaagtagtgacatgtcactatcg
atgctggtaaaactcttgattatcgatgaagtacatctgctgaatgatgatagagggcct
gtaatagaagctttagtggctcgcactcttcgccaggtggaatccacacagtcaatgatc
cgtattgtggggctatcagctacacttcccaattatctggaggtggcacaattcttgagg
gttagtcccgatgcgggtctctttttctttgattctagttaccgccctgtgcctcttgca
cagcaatatattggaattacagaaccaaactttcaagcacggaacgaacttttgaatgaa
gtttgttacaaaaaggttgttgagtcgttgaagcaagggcatcaggcgatggtgtttgtt
cattcacgtaaagacacagggaaaacagctgataaactgatagaacttgcccggaagtat
aatgaactagacctctttatgaatgaagaacatcctcagtttcatttggtcaagatggag
gttgcaaagtcccgaaacaaacagcttgttcagctatttggatcaggagttggcattcac
catgcagggatgttgcgtgctgacagaggtttgaccgaacgccttttttctgatggattg
ttgaaggtcttagtttgtacagcaactttggcatggggagtcaatctacctgcacacact
gttgtgattaaggggactcaactgtacgatccgaaggctggtggatggcgagatttaggc
atgctggatgtcatgcagatttttggacgtgctggtagacctcagtttgataaaagtggc
gaaggcattataattacatctcatgataagttagcttactatctgcgactgttgacaagt
caacttcccatagaaagtcagttcattagctccttgaaagataacctaaatgctgaggta
acactgggaactgtgacgaatgtgaaagaagcttgtgcatggctcggatacacgtacctg
ttcataaggatgaaaatgaatcctttggcatatggtattggatgggatgaggttatcgca
gatccttcattgggtatgaagcaaagatcccttgttacagatgctgcacgcgctcttgac
aaagctaaaatgatgcggtttgatgaaaaaagcggcaacttttattgcaccgaacttggt
cgcattgctagtcacttctatatccattattctagtgttgagacatacaatgagatgctg
aggcgtcatatgagtgatagtgagataattgacatggttgctcattcttcggaatttgaa
aatattgttgttcgagaggaggagcaaaacgaattagaaacattgttacgcacggtctgt
cctttagaagtaaagggtggtcccacaaataaacacgggaaagtatctattctaattcag
ctatacatatctcgaggttctatcgatgcattttccttaatttctgatgcggcatatatt
agtgccagcttggctcgtataatgcgggccctttttgaaatctgtttgcgtagaggatgg
tgtgagatgacgtctttcatgttggagtattgcaaggctgtcgatcgtcaaatatggccc
caccagcatcccctaaggcagtttgacagagatatatcacaagaaatacttcggaaacta
gaagaacaagagattgacttggatcatcttcaagagatgaaggagaaggagattggagct
atgattcgttatgcacctggaggaagggtggtgaagcaatacttagggtttttcccatca
atcatattgtctgctacaataagtccgatcaccagaactgttttaaaggtagatctggtc
ataactccagattttgtgtggaaagatcgctggcatggtgctgctcaacgctggtggatt
cttgttgaggattcagataatgaccatctttatcactcggagctttttacattgaccaaa
cgagcagcaaaaggagacccacaaaagctttcctttactgtgccaatattcgaaccacat
cctcctcaatactacattcgtgctgtttctgattcttggttgcaagcagaggctttctat
acaatatcttttaagaaccttgccttaccagagagccatacgacacatactgaacttcta
gatctgaagccacttcctgtgactgcacttggcaacaaggcttatgaaaatttgtacaga
ttttcacacttcaatcctattcaaacgcaggccttccatgttttatatcacacgcaaaat
aacatcctcttaggagctcctactggaagtgggaaaactatatctgcagagctagctatg
cttcatttgttcaattcagcacctgatatgaaggttatctacatagcaccgttaaaggcc
attgttcgagaaagaatgaatgactggaagaatggccttgttactaaacttggaaagaag
atggttgaaatgactggtgattacacaccagatatgatggcccttatgtcagcagatatc
attatatcaactcctgaaaagtgggatggtattagtcgtaattggcacagtcgaagctac
gtcacaaaggttggtcttatgattttggatgagattcaccttcttggagctgatcgtgga
cctatactggaggtcattgtctcaaggatgagatacatatcatcacaaacagagcgacct
gttcggtttgttggtttgtcaacagcactagcaaatgctcaaaatctggctgactggtta
ggagttgatgagatcggtttgttcaatttcaagccaagtgtgaggcctgtgcctctcgaa
gttcatatacaggggtatcctgggaaattctactgtccaagaatgaatagcatgaataag
cccacctatgctgccatatgtacacattcacctacaaaaccagttctaatttttgtttca
tctcgacggcaaacgcggcttactgcattagacctcatacagtttgcggcttcagatgaa
catccagtacagtttctagccatgcccgaggatgcactacagatgattctttctcaggtc
actgatcagaatctgagacacactttacagttcggtattggtttacatcatgcaggattg
aacgataaagatagatctttagttgaggaacttttcgcaaacaacaagattcaggtattg
gtttgcacaagtactttagcttggggggtaaaccttccagctcatttggttataattaag
ggaacagagtattacgatggaaaagcgaagcgatatattgattttccgatcacagacatc
ttgcaaatgatgggtcgtgcaggtcgtcctcagtatgatcaacatgggaaagcagtcatt
cttgtgcacgaacctaaaaaaagcttctacaagaagttcctttatgaaccatttccagtt
gaaagcagtcttcgagaccaactccatgatcacatcaatgccgagatagtttctggaaca
atttctcataagcaggatgcagtacattatttgacctggacatatctgttccgcaggctg
atggttaatccggcttattatggattggaagattgtgatcctgaaagtctaagttcttac
ttatccagccttgtgcaaaacacatttgaagatttggaagacggtggatgcattaagatg
gatgaggaaaatgtggagcctttgatgttaggctcaatagcatctcaatattatctgaaa
tatatgacgatttccatgtttgcttcaaatatagggccagatacatctctcgaagttttt
cttaatgtactttctgctgcttctgaatatgatgaacttcctgtccgtcataatgaggaa
aattacaatgaagcattgtctgccaaagttccattagcagtggacaagaatcgcctcgat
gatccacatgtaaaaacaaatttgctttttcaggcacatttctctcaagtagaactgccg
atcagcgactactataccgacttaaagtcagtgttggatcagagtatacgtatcattcaa
gcaatgatagatgtttgtgcaaatagtggatggctctcgagttccattacttgtatgcat
cttcttcaaatggtcatgcagggtatgtggtttgagaaagattctcccttatggatgctg
ccatgcatgactgaagaccttgtcatttcattgcaaaaaggaggagtctctaatatacaa
cagcttttaaatctcccaaacacaaatatgcaatctagatttggaaacattgcttcaaga
ctacagcaggatctacaacattttcctcgtattcaagtcaaactcaagatagaaggaagg
gatgtagatagcgacaacaaaccaagtctcagcatacggttggagaaattcaaccgcaga
aaaacttccagagcttttaccccccgttttccaaagttaaaagatgaagcatggtggttg
gttcttggcaacacttccacctctgaattgcatgctcttaaaaggatttccttcacagat
cgtttggttactcgcatgaagttaccatcaaccacaactagttttcagggaatgaagctg
cttcttgtttcagattgttatcttggttttgatcaagaatactcgattgaagaactaatg
gagtcttag
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integrated database retrieval system
