Helianthus annuus (common sunflower): 110942110
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Entry
110942110 CDS
T05101
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110942110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110942110
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110942110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
110942110
NCBI-ProteinID:
XP_022039522
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Position
5:171165713..171174823
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AA seq
284 aa
AA seq
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MQSAEQLVLDLSSPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPFLS
PPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLT
SLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDY
ICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLR
DATFSSCLREDPTTRRWLQQLVHNVQGPRVALQGGGGFDHMLVN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgccgagcaattggttctcgatctcagcagtcctgatcttcgcgaaaacgca
cttcttgaactctctaagaaaagagaactgtttcaagatttggctccactactgtggaac
tcttttggtaccattgcagctctattacaggaaatcgtttcaatatacccctttctgtca
ccacccaatctgacgccagctcaatcgaacagagtttgcaatgcgcttgctcttcttcag
tgtgtagcttcacatccagacacacggatgctgttcttgaatgcccatattcctttatat
ctataccctttcctcaacacaacaagcaaatcaaggccatttgaatatctgaggcttact
agtttaggtgtcatcggtgccctagtgaaggttgatgacacagaagttatcagttttctg
ctttcgacagaaataatccctctgtgcctacgcactatggaaatgggcagtgaattgtca
aaaacagttgccacattcatagttcaaaagatcttgttggacgatgttggattggactac
atttgcacaaccgctgaacgttttttcgcagtgggtagggttttggggaatatggttgca
gcgcttgctgagcagccatcttcacgacttttgaaacacattatccgatgttatctccgt
ttgtctgataatcctagggcgtgtgacgctttgaggagttgtcttccagatatgctacga
gatgctacttttagcagttgccttcgtgaggaccccacaacaagaaggtggcttcaacag
ctagttcataatgttcaaggaccccgggttgctcttcagggaggtggagggtttgaccac
atgctggtcaactga
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