Helianthus annuus (common sunflower): 110942172
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Entry
110942172 CDS
T05101
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110942172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110942172
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110942172
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Motif
Pfam:
LRR_6
F-box
LRR_At5g56370
F-box-like
LRR_4
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110942172
NCBI-ProteinID:
XP_022039607
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Position
5:173072892..173077197
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AA seq
347 aa
AA seq
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MEGGGMGVGRVITDWSEIPVELLMRVVSSLDDRTVVVASCVCCGWRDAICWGLTRISFSW
CKNNMNNLVLSMAPKFRNLTGLVLRQDKPQLVDNVVETIANSCHDLEDLDLSKSFKLSDR
SLYALAHGCQKLIKLNISGCSSFSDDALAYLSSYCRQLKVLNLCGCVRAASDKALKAIGY
NCSQLQSLNLGWCEEVGDAGVTSLAYGCHDLRALDLCGCVLITDESVIALANNCLHLRSL
DLYYCRNITDRAIYALAHIRVKNKNQMWDGVKTGDEDEDGLMSLNISQCTALTPPAVQAL
CDSFPALHTCPGRHSLIISGCLNLTSVRCACAFQAHQEVNTLAHHAY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggtggaatgggtgttgggagggtgataaccgactggagtgagattccggtg
gagcttttgatgcgggttgtgtcgtcgttggatgatcggacggttgtagttgcttcttgt
gtttgttgtggatggagagatgctatttgttggggacttactcgtatttccttttcttgg
tgtaaaaacaacatgaacaacttggtgctttctatggctcccaagtttagaaatttaacg
ggtttagtccttcgtcaagataaaccgcagttagttgacaatgtggttgaaaccattgca
aatagctgtcatgatcttgaagatcttgaccttagcaagagctttaagcttagtgatcga
tcgttatatgctttggcacatggttgtcaaaagcttattaagctcaatatcagcggatgc
tcttcgtttagcgacgacgctcttgcatatctaagtagttattgcagacaattgaaagtt
ttgaatctttgtggatgcgtaagagctgcatctgataaggcattgaaggcaatcggatac
aactgtagtcaacttcagtcattgaacctaggatggtgcgaggaagttggtgacgctgga
gtaacgagtttagcgtatggctgtcacgatctgcgtgcactcgacttatgtggttgcgtt
cttataacagatgagagtgtgatagctttagcaaacaattgcctgcatctaagatctttg
gatctttactactgtcgaaacatcacggaccgagcgatttacgcattggcacatattcga
gtgaaaaacaagaaccaaatgtgggatggggttaaaaccggggatgaggatgaagacggg
ctcatgagtctcaacattagtcaatgcactgctttaacaccgccagcggttcaggctcta
tgtgattcatttccagcgcttcatacgtgcccgggtaggcattcacttatcataagtggt
tgtttgaatttaacttcggttcgttgcgcgtgtgctttccaagcgcatcaggaggttaac
acacttgctcatcatgcttattga
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