KEGG   Helianthus annuus (common sunflower): 110943377
Entry
110943377         CDS       T05101                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03018  RNA degradation
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110943377
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110943377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110943377
   03041 Spliceosome [BR:han03041]
    110943377
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110943377
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110943377
Spliceosome [BR:han03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110943377
 Complex C
  U2 snRNP components
    110943377
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C
Other DBs
NCBI-GeneID: 110943377
NCBI-ProteinID: XP_022040824
LinkDB
Position
1:complement(6291730..6294367)
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKFPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcctacttcaaggatttggtcggaagagaagtcaccgttgaactgaag
aatgatttagcgattagaggcactcttcattccgtcgatcaatatctcaatatcaaactc
gaaaacaccagagtcgttgatcaggacaagttccctcacatgctttcggtgaggaactgt
ttcatcagaggatcagtagtgaggtatgtgcagttaccgccagacggagtagacatcgag
ctgctccatgatgccactagaagagaagcccggggcggttag

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