Helianthus annuus (common sunflower): 110943377
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Entry
110943377 CDS
T05101
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110943377
09123 Folding, sorting and degradation
03018 RNA degradation
110943377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110943377
03041 Spliceosome [BR:
han03041
]
110943377
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110943377
mRNA degradation factors
5'-3' decay
Lsm complex
110943377
Spliceosome [BR:
han03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110943377
Complex C
U2 snRNP components
110943377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
Motif
Other DBs
NCBI-GeneID:
110943377
NCBI-ProteinID:
XP_022040824
LinkDB
All DBs
Position
1:complement(6291730..6294367)
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AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKFPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcctacttcaaggatttggtcggaagagaagtcaccgttgaactgaag
aatgatttagcgattagaggcactcttcattccgtcgatcaatatctcaatatcaaactc
gaaaacaccagagtcgttgatcaggacaagttccctcacatgctttcggtgaggaactgt
ttcatcagaggatcagtagtgaggtatgtgcagttaccgccagacggagtagacatcgag
ctgctccatgatgccactagaagagaagcccggggcggttag
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