KEGG   Helianthus annuus (common sunflower): 110943476
Entry
110943476         CDS       T05101                                 
Name
(RefSeq) nuclear exosome regulator NRDE2
  KO
K26109  nuclear exosome regulator NRDE2
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110943476
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110943476
SSDB
Motif
Pfam: NRDE-2 HAT_Syf1_CNRKL1_N Suf HAT_PRP39_N TPR_19 TPR_11
Other DBs
NCBI-GeneID: 110943476
NCBI-ProteinID: XP_022040918
LinkDB
Position
14:31431152..31445968
AA seq 1153 aa
MADESPAVEEQEPLRPPSTTLFPVSKQTPSAPINPLQVSNSTTPTPTPTWLTNTSFTADI
STINDVVSSLHHHHTEPEQTAEEQQTDERRRYDLVDSSASDQDEDVDVDGRSSRKKEKRK
RRKRKQRDYEYGSLSRKHKIQSWATDATGSNKEYYFDSRGDLDNLAFGSLYRMDIARYKL
FHGTKSSSFNYNAFGPSNTKYSDFDRDNDANSLDTKLKSEGRYWSAKYAALEHHRNFKRF
RIVAPKDSSQQTATDFIPLSDETASIDGQPTNSSIVEESWEDEVLRKTKHFNKMTREQPY
NDKIWLEFAEFQDKVESRQPQRGARLQTLEKKISILEKAVELNPDNEELLLALMNAYQRR
DNNDVLIGRWEKLLTRHSGSYKLWREFLRFVQGDFSRFKVSEVRKMFANAIQALSAACSK
HHRQAQQNDKSSADPLLVQQELGLVNTFVSLCRFEWNSGYQELATALFQAEIEYSLFCPS
LLLSEHGKQRLFEYFWNSTGARIGEDGAHGWLNWLEKEEEQRQKAMIESESSANVDEGGW
TGWQEPKTEGDVAVADVGMVDGGEDDDVGMEEKDDTEALMKLLGIKGEIEANGEVQDVST
WVKWSEEELSRDFNQWMPVRAESGSSVKDELVDKEGDDQLLRSVLFEDVSEYLFSITTEE
VRLSLVYQFIDFFGGRISQWSSTNSSSWAERILMMESPPDSMLDDLRKAEGILRKSESCE
SGYSLEHVLNGFDNIHMRSEIMKFVRNVTLQCLNVFSHDHVLKEGALVAEELSKTRMNSC
CVAVTPCRPLAKSLLKSNRQDVHLCGVYAKREAAFGNIEYARKAFDMALLSIEGLPWDAK
SKAALLFFWYAEVELNGNSSESLPRALHILCCLGCGIKYTPFKSQPSSLQLLRARQGFKE
QVRMIQATWIRGTIDDNSVASVCSAALFEELTTGWEAAIDVLNQALSTVLPERRSQSHQL
ELLFNFHMNLLWKHHSQSELANVWKFVLQGLQIYPFSPKLYNAVVQIGHLHTSPNKLRWI
IDDFLHKKPSVTLCLFALSYEISKGSSCHRIHRIFEKALADNVLRDSVLLWRLYIDYDIH
VACDLSAARRVYFRAIHTCPWSKKLWLDGFTKLNSVLTTKELSDLLEVMRDKEINVRTDV
YEILLQDEMDLSS
NT seq 3462 nt   +upstreamnt  +downstreamnt
atggcggatgaatcaccagcagtagaagaacaagaacctctccgcccaccatccacaaca
ctcttccctgtatccaaacaaaccccatctgccccaattaaccctctacaagtctccaat
tccaccacccccacccccacccccacttggctcactaacaccagcttcaccgccgacata
tcaaccatcaacgacgtcgtatcctcccttcaccaccaccacaccgaacccgaacaaact
gcagaagaacaacaaacagatgaacgacgtcgttacgatttggttgactcgtccgcatcg
gatcaggatgaggatgttgatgttgatggcagaagcagtaggaaaaaggagaaacggaaa
cggaggaagaggaagcagagggattatgaatatgggtctttgtctaggaagcacaagatt
cagtcatgggcgactgatgctactgggagtaataaagagtattactttgattcgcgtggg
gatcttgataatttggcttttggttctctttacagaatggacattgctagatataaacta
tttcatggaaccaagtcttcttcgtttaactacaatgcattcggtccgtcgaacacaaag
tattccgacttcgatagagataacgatgcgaattcattagacactaaactcaaatccgaa
ggacgttactggtccgctaagtacgctgcattagagcaccataggaactttaaacgcttt
cgaatcgtcgctcctaaagactcatcccaacaaaccgctactgatttcataccactttca
gatgagacagcttcaatcgacggtcaaccgacaaattcctcaatagtcgaagaatcatgg
gaagatgaggtgttacggaaaacaaaacatttcaacaaaatgacgagagagcaaccgtat
aacgacaaaatttggttagaatttgcggaatttcaagataaagttgaaagcagacagccg
caacggggtgcgcgtttacagacgttggagaagaagattagcatattggagaaggcggtc
gagcttaatcctgataacgaggaactacttcttgcgcttatgaacgcgtatcaaagacga
gataataatgatgtgttgattggtagatgggagaagttgttgacgcgccattcggggagt
tacaagctttggagggagtttttgagatttgttcaaggggatttttcgagatttaaggtt
tcagaagtgcggaaaatgtttgcgaatgcgatacaggctctgtcggctgcatgcagcaag
catcataggcaggctcaacagaacgataaatcatcagcggacccacttcttgttcaacaa
gaacttggactggtcaatacattcgtgagtttatgccggttcgagtggaattcgggctat
caagaattagctacagctttatttcaggcggaaatagaatacagtttattctgtccatct
ttacttctatccgagcatggtaaacaaagactgtttgagtacttctggaatagtaccggt
gcacgaatcggagaagacggggcccacgggtggttaaattggctcgaaaaagaggaagaa
cagagacaaaaggcgatgatagagtctgagtcatctgctaatgttgatgaaggcggctgg
acgggttggcaagaacctaaaaccgaaggtgacgtggcagttgctgatgttgggatggtt
gacggtggtgaagatgatgatgtgggtatggaagaaaaagatgatacggaggctttaatg
aagttgcttgggatcaagggtgaaattgaagctaatggtgaggtgcaagatgtatcgacg
tgggttaaatggtcagaggaagagttgtcgagagactttaatcaatggatgcctgttcgc
gcggaatctgggagttcagttaaggatgagctcgtagacaaggaaggtgatgaccaactt
ctgagatcggtattatttgaggatgtgagtgagtacttgttttcaataactacagaggaa
gttcgtttgtcactcgtgtaccagttcattgatttctttggagggagaatttcacagtgg
tcttcaactaatagctcgagttgggccgagagaatcctaatgatggagtcaccgccagat
tcaatgttggatgacttgaggaaagccgaggggattttgagaaaatctgaaagctgtgag
agcggttacagtttagaacatgttttgaatggcttcgataacatacatatgagaagtgag
attatgaaatttgttcggaatgttactttacaatgtttaaatgtattttcgcatgaccac
gttttaaaagaaggtgcacttgttgccgaagagctttcgaaaacaaggatgaattcatgt
tgtgttgcagtcactccatgtcgcccattggcaaagagtctgttaaaaagcaaccgccag
gatgtacatctatgcggtgtttacgcgaaaagggaggctgcattcggaaatatagaatac
gcacgaaaggcgtttgacatggcattgttatcaattgaaggcctcccatgggatgctaaa
tcaaaggccgcccttttgtttttttggtacgcggaggtggagcttaacggtaactcgtca
gaatcattaccacgtgcattgcacattctttgttgtttgggatgcgggataaaatatact
ccgtttaaaagtcaaccatcaagtctgcagttgttgagggcccgccaaggatttaaggaa
caagtaaggatgattcaggcaacgtggatacgtgggaccatagatgacaattctgttgct
tctgtttgttctgctgctttatttgaagagttgactaccggatgggaagctgctatagat
gttctaaatcaagctctttctactgttcttccagaaagaagaagccaaagtcatcaactt
gaattattattcaatttccacatgaacctactttggaaacatcactcgcaatcagaatta
gcaaacgtttggaagttcgttttacaagggttgcagatatatccattcagccctaaactc
tacaatgcagttgttcaaatcggacatcttcatacttcacctaataaactaaggtggatc
attgatgacttcttacataagaaaccatcagtgacgctttgtctctttgctttatcatat
gagattagtaagggaagttcatgtcatagaatacatagaatctttgaaaaggcgttggct
gacaacgtgttgcgggattctgtactgttgtggcgactgtacatcgattatgatattcat
gtggcgtgtgacttgtctgcggctagacgagtttacttccgtgccatccacacatgtcca
tggtcaaaaaaactatggctggatgggttcaccaaactaaactctgtgttaaccacaaaa
gagctttcggatctgttggaagttatgcgagacaaagaaatcaatgtgaggactgatgtg
tatgagatccttttgcaagacgagatggatttatcctcgtaa

DBGET integrated database retrieval system