Helianthus annuus (common sunflower): 110945016
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Entry
110945016 CDS
T05101
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110945016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110945016
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110945016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Nup35_RRM_2
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
110945016
NCBI-ProteinID:
XP_022042347
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All DBs
Position
1:35237899..35242443
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AA seq
478 aa
AA seq
DB search
MEMESGKLFIGGISWDTNEERLKEYFQTFGEVIEAVIMKDRTTGRARGFGFVVFSDPAVA
EKVVKEKHMIDGRSVEAKKAVPRDDQQILNRSSGSVQGSPGPTRTKKIFVGGLASSVTEN
DFKNYFEQFGMITDVVVMYDHNTQRPRGFGFITYESEESVDKALQKTFHELNGKMVEVKR
AVPKESSPGPNRSQISGFNYGLSRANSFLNYGLGQGYNSPGYGARMDGRFSPVSAGRTGY
PPFSPSSYNLGLNSDSIFGLNYGGNGSFGSNLGYGRAINPMYGVTSNRYADPIGYGMGGG
NGSSNGGGGNALVLNSSNNNMWGNGSQSFNANSSNLNNFLAAGNGSDGLGAIWGNSNAGQ
GGGNAGFISGNLNYGNEESAIGYRRNNGSSVDPAYSYGVIDDGDNMFGGGGGSTAAAGSG
GGDSFYADSTWRASSPDLEVSDLFGYNLGSGASDGIPKNSVGYVGYSVANRSNRGIAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagagtgggaagctgttcattggtgggatttcatgggacaccaatgaagaa
cgcttgaaggagtattttcaaacgtttggtgaagtgattgaagcggttataatgaaggat
cgaaccacgggccgtgctcgtgggtttgggtttgttgtgttttctgaccctgctgttgct
gaaaaagttgtgaaggaaaaacatatgatagatggtagaagtgtagaagcaaagaaggct
gttccaagggacgatcagcagatccttaaccgtagcagtggcagcgtgcaaggctcaccg
ggtcccactcgcacaaaaaagatcttcgttggaggtttagcatcctccgtcaccgaaaac
gatttcaaaaactatttcgaacaatttgggatgataactgatgttgtggttatgtacgat
cacaacacacaaaggcctcgaggattcggattcatcacttatgaatcagaggaatccgtt
gataaagcgttgcagaaaacttttcatgaactgaatggtaaaatggtggaagtcaaacgc
gcggttccgaaagaatcatcccccggtcctaacaggagtcagataagtggatttaattac
ggtttaagtagagctaatagtttccttaactatggtttaggtcaggggtataatagtccc
ggttatggtgcacgaatggacggtagatttagcccggtttctgctggtagaaccggttat
ccaccgtttagtccatctagttataatttgggattaaattccgattcgattttcggttta
aactatggcggaaacggaagttttggatctaatcttggatatgggcgtgcgatcaacccg
atgtatggtgtgacttcaaacaggtatgccgatccgatcgggtatggcatgggtggcggt
aatggtagcagtaatggtggcggtggaaatgcgttagttttgaactcgagtaataataac
atgtggggaaacgggagccaaagttttaatgcgaattcgtcgaatttgaacaactttttg
gctgctggaaatggttctgacgggcttggagcgatttggggtaattccaatgcgggtcaa
ggtggcggtaatgcaggtttcattagtggtaatcttaactatggcaatgaagagagtgct
attgggtataggaggaacaatgggagtagcgttgatcctgcctattcgtacggtgtgatt
gacgacggtgataacatgtttggtggtggtggtggtagtactgctgctgctggcagtggt
ggtggtgattcgttttatgcggactctacttggcgggcatcgtctcctgatctggaagta
tctgatttatttggttataatcttggaagtggagcttctgatggtatacccaaaaactca
gttggttatgtcggttatagcgtcgcaaatagatcaaatagaggaatcgctgcatag
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