Helianthus annuus (common sunflower): 118489201
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Entry
118489201 CDS
T05101
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118489201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
118489201
Spliceosome [BR:
han03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118489201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
NBCH_WD40
PRP4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Vps41
Beta-prop_SCAP
Tricorn_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
118489201
NCBI-ProteinID:
XP_035842791
LinkDB
All DBs
Position
17:complement(143972848..143977357)
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AA seq
546 aa
AA seq
DB search
MEIDEKENPNPNPNSNSTTPPPAQIAPIEPPIPLIPPPIAPIPRPLAPIPSVRPPNGETA
KKTTEDAASDEDGDDSGPEYEVSEESRLFREKKEKAKQDFLMKQRAAALAVPTNDKAVRS
RLRRLGEPVTLFGEREMERRDRLRMIMAKLDSEGRLDTLMKVLEEEEAAVNVEDGGGEDE
GEMVEYPFYTEGSTALLKARFEIAKESVVKAAVRLGRARRKRDDPDEDVDAEINWALDGA
KSFALDCSEIGDVRPLAGCSFSCDGKFLATCSLTGVAKIWSMPGVNSVSSLKGHAERATD
VKFSPTNDQVATASADRTAKLWNTEGTLLNTYTGHLDRLARVAFHPSGKYLGTTSFDKTW
RLWDTETGDELLLQEGHSRSVYGLAFHPDGSLVASCGLDALARVWDLRSGRSILALEGHV
KPVLGISFSPNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHANLISDIKFEPQEGYFLVT
ASYDMTAKIWSSRDFKPVKVLSGHEAKVTSVDVAADGQSIATVSHDRTIKLWSSKNAEKD
KAMDVD
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggagattgacgaaaaagaaaaccctaaccctaaccctaactctaattccaccactcca
ccaccggctcaaattgcaccaattgaaccaccaattccactaattccgcccccaatcgcc
ccaattccccgtccactcgcccccattccgtcagtccgtccaccaaatggcgaaaccgca
aagaaaaccaccgaagacgccgcttcagatgaagacggcgacgattcaggcccggagtac
gaggtttcagaagagagcaggttgttcagagagaaaaaggagaaagcgaaacaggatttc
ttaatgaagcaacgcgctgcggcattagcggttccgacgaacgacaaggcggtgaggtct
cggctgaggcggttaggggaaccggtgacattgttcggtgagagggagatggagagaaga
gataggttgaggatgattatggcgaagttggattcggaagggcggttggatacgctgatg
aaggttttggaggaggaagaagcggcggtgaatgtggaggatggagggggggaagatgaa
ggggagatggttgagtatccgttttatacggaggggtcaactgcgttgttgaaagcacgg
tttgagattgcgaaggagtcggtggtgaaggctgcggtgaggttgggaagggctaggagg
aagagggatgatccggatgaagatgtggatgcggagattaattgggcgttggatggtgcg
aagagctttgcgttggattgtagtgagattggggatgtgagaccgcttgcagggtgctcg
ttttcgtgtgatggcaagtttcttgctacatgttctttaactggagttgctaaaatatgg
agcatgccaggagtaaacagtgtgtcctcactaaaggggcacgctgaacgagcaaccgat
gttaaattttctccgacaaatgaccaagtcgccactgcttctgctgaccggactgcaaaa
ttatggaacacagaaggaactctgttaaatacatacacgggtcatttggaccggctagct
cgtgtggcgttccatccatcagggaaatatttaggtacaactagctttgataagacctgg
agattatgggatacagagactggtgacgagttacttcttcaagaaggtcatagccgaagt
gtgtatggtttggcttttcaccctgatggctcgctagtcgcgtcatgcgggcttgatgca
cttgctcgtgtgtgggacttacggtcagggagaagcattcttgccttagaaggtcatgtg
aagccggttctgggtatcagtttctcgccaaatgggtatcatttagcaacaggaggtgaa
gataacacttgtagaatttgggatttgaggaagaagagatcactgtacacaatccctgca
catgcaaatcttatttctgatattaagtttgagcctcaagagggatactttttggtaacc
gcttcttatgatatgactgctaagatctggtcatccagagattttaaacctgtcaaagtc
ctttccggtcacgaagctaaagttacatctgttgatgtagctgcagatgggcaaagtatt
gcgactgtttctcatgacaggacaattaaactatggtctagcaaaaatgctgaaaaggat
aaggcaatggatgttgactga
DBGET
integrated database retrieval system
