Helianthus annuus (common sunflower): 18251002
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Entry
18251002 CDS
T05101
Symbol
ccmFn, AT66_p07
Name
(RefSeq) cytochrome c biogenesis FN
KO
K02982
small subunit ribosomal protein S3
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
18251002 (ccmFn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
han03011
]
18251002 (ccmFn)
Ribosome [BR:
han03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
18251002 (ccmFn)
Bacteria
18251002 (ccmFn)
Archaea
18251002 (ccmFn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
VAR1
Motif
Other DBs
NCBI-GeneID:
18251002
NCBI-ProteinID:
YP_008999571
UniProt:
W0FC56
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All DBs
Position
MT:228434..230110
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AA seq
558 aa
AA seq
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MEAPPIKQERSGSSHGGARIDSIYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCII
LHFPKRTFIHFFLPRRPRRQKRREKSRPGKGKGQWWAFGKVGPIGCLHSSDGTEEERNEV
RGRGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPK
YAGLVNDIALLNDDSFRKTKLFKFFFSKKSKKSPSDSPTSHPLKRTLPAVRPSLNYSVMQ
YLLKTKNQMHFDPVVVLNHFVEPGVVEPSTMGGAHAQGRSLDKRIRFAFFVESSTSEKKF
LAEDKKLTHFIRWSNHPRFAGTTKTTISLFPFFGATFFFPRDGVGVYKKFFEYAREQLLR
KFRKKCWNLMAKDKVMELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVK
KMRSLLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLV
MKKGVEGIRICCSGRSEGAEIARTECENYGKTSSNVFNQKIDYAPAEVSTRYGISGVKVW
ISYSQKERGRAISETYEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaagccccccctatcaagcaagaaagaagcggctcttcccacggcggagcccgcatt
gactctatttattattatggtaaatcagtgtatcaagatgtcaatcttagatcttatttc
ggttcgatacgtccacctactagactcacctttggctttcgtctcggtaggtgtattatt
ctacattttcccaaaagaacattcattcatttctttcttccccgtcgaccacgacgacag
aaacgacgcgaaaaatccagacccggaaaggggaagggccagtggtgggcatttggtaaa
gtcgggccgatcgggtgtcttcattcaagcgacggtacagaagaagaacgaaacgaagtg
agaggccggggggcagggaaaagagtcgagtcgatcaggctcgacgaccgggagaagcaa
aacgaaatcaggatttggccgaaaaagaagcaacgctatggataccatgaccgatcacca
tcgataaagaagaatctttctaaatcacttcgggtcagcggggccttcaagcatccgaaa
tacgccgggcttgtaaatgacatagccctcctaaatgacgactccttcagaaaaacgaag
ttattcaagttctttttctcaaagaagtcaaagaagtccccctccgacagcccgacgagt
catccacttaaaaggaccctccctgcggtgcgcccttccttgaattattcggtcatgcaa
tacttattgaagacaaagaaccaaatgcatttcgaccccgtcgtagttctcaatcatttc
gtggaaccgggcgtggttgaaccatctaccatggggggagctcatgcacagggaagaagc
ttagataagagaatacgtttcgctttttttgtcgaaagctcgaccagcgagaaaaagttt
ttggccgaagacaaaaagttgacccacttcattcgctggtcgaatcatcctcgcttcgcg
ggaacaacaaaaaccaccatctcgctctttcctttcttcggtgctacctttttctttcca
agggacggggttggggtgtataagaaattttttgagtatgcccgggaacaactcctacga
aaattcaggaaaaaatgttggaacctcatggctaaggataaggtaatggaattgatagag
aaattcatagacctaggtgggataggagaattgataaagggaatagagatgatgatagag
atcatactgagaaacagaagaattccgtacgggtacaacttttatttgaacgaagtgaaa
aaaatgcgatctttgttgtctaatagaacaaagactaataccttaattgagtcggtcaag
atcaaatctgtttatcaaagtgcttctccgattgctcaagatatctcttttcaaccgagg
aacaaaacaagatcatttcgctccatttttagtcaaatagtgaaggatattcgattagta
atgaaaaaaggggtggaggggatccgtatatgttgttcaggtcgatcagaaggtgcagaa
atagctagaactgaatgcgaaaattatggaaaaacatctagtaatgtatttaaccagaaa
atagattatgctcctgcggaagtatctactcgttacggaatctcaggtgtcaaagtgtgg
atttcatatagtcaaaaagaaaggggacgtgctatatccgaaacgtacgaaatctag
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