Helianthus annuus (common sunflower): 4055574 Help Entry 4055574           CDS       T05101                                  Symbol rpoC2, HeanCp010 Name (RefSeq) RNA polymerase beta'' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism han  Helianthus annuus (common sunflower) Pathway han03020   RNA polymerase Brite KEGG Orthology (KO) [BR:han00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     4055574 (rpoC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:han03021]     4055574 (rpoC2)    03400 DNA repair and recombination proteins [BR:han03400]     4055574 (rpoC2) Enzymes [BR:han01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      4055574 (rpoC2) Transcription machinery [BR:han03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      4055574 (rpoC2) DNA repair and recombination proteins [BR:han03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       4055574 (rpoC2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 Motif Other DBs NCBI-GeneID:  4055574 NCBI-ProteinID:  YP_588106 UniProt:  Q1KXX0 A0A172W3U8 LinkDB All DBs Position Pltd:19192..23280 Genome browser AA seq 1362 aa AA seqDB search MEVLMAERPTQVFHNKVIDGTAMKRLISRFIDHYGIGYTSHILDQVKTLGFRQATAASIS LGIDDLLTIPSKRWLVQDAEQQSVLLEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMT PNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT EYIISCYGARKGVVDTAIRTSDAGYLTRRLVEVVQHIVVRRTDCGTVRGISVSPRNGMMA DRIFIQTLIGRVLADDIYIGSRCIATRNQDIGVGLVNRFITFRAQPISIRTPFTCRSTSW ICQLCYGRSPAHDDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPF NGKIKFNEDLVHPTRTRHGHPAFLCSRDLYVTIESEDIIHNVCIPPKSFLLVQNDQYVES EQVIAEIRARTSTLNLKEKVRKHIYSDSEGEMHWNTDVYHAPEFTYGNIHLLPKTSHLWI LLGEPWRSSLGPCSIHKDQDQMNAYSLSVKRRYISNPSVTNNQVRHKFFSSYFSGKNKKG DRIPDYSELNRMTCTGRCNLRYPGILDGNSDLLAKRRRNRVIIPLDSIQEGENQLIPSSG ISIEIPRNGILRRNSILAYFDDPRYIRKSSGLTKYETRELNSIVNEENLVEYRGVKVFWP KYQKEVNPFFFIPVEVHILAESSSIMVRHNSIIGVDTQITLNRRSRVGGLVRVKKKAEKI KLIIFSGDIHFPGKTNKAFRLIPPGGGKQNSKEYKKLKNWLYIQRMKLSRYEKKYFVLVQ PVVPYKKTDGINLGRLFPADLLQESDNLQLRVVNYILYYDPILEIWDTSIQLVRTCLVLN WDQDKKIEKACASFVEIRTNGLIRDFLRIDLAKSPISYTGKRNDLPGSGLISENGSDRAN GNPFSSIYSYSKATIQESLNPNQGTIHTLLNRNKESQSLIILSSSNCSRIGPFNDVKYPN VIKDSIKKDPLIPIRNSLGPLGTGFPIYHFDLFSHLITHNQILVTNYLQLDNLKQIFQIL KYYLLDENGKIYNPYSCSNIILNPFKLNWYFLHYNYCEETSTIVSLGQFLCENVCIAKKG PHLKSGQVLILQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLVTFIYEKSRSGDIT QGLPKVEQVLEVRSIDSISMNLEKRIEGWNKCITRILGIPWAFFIGAKLTIVQSRISLVN KVQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDEMSNVFSPGELIGLLRAERMGRALEE AICYQAVLLGITRASMNTQSFISEASFQETARVLAKAALLGRIDWLKGLKENVVLGGMIP VGSGFKTPSSEPNNIPNNIAFELKKKNLLEGEMKDILFYHRK NT seq 4089 nt NT seq  +upstreamnt  +downstreamnt atggaggtactgatggcagaacggcccactcaggtctttcacaataaagtgatagacgga actgccatgaaacgacttattagtcgatttattgatcactatggaataggatatacatca catatcctggatcaagtaaagactctgggtttccgacaagcgaccgccgcatccatttca ttaggaattgatgatcttttaacaataccttctaaaagatggctcgttcaagacgctgaa caacaaagtgttcttttggaaaaacaccatcattatgggaatgtacacgcggtagaaaaa ttacgtcaatcaatcgagatatggtatgccacaagtgaatatttgcgacaagaaatgact cctaattttcggatgaccgatccttttaatccagtccatataatgtctttttcgggagcc agaggaaatgcgtctcaggtacatcaattagtaggtatgagaggattaatgtcggatccc caaggacaaatgattgatttacccattcaaagcaatttacgcgaaggactctctttaaca gaatatattatttcttgctacggagcccgtaaaggagttgtggataccgctatccgaaca tcagatgcaggatatctcacgcgcagacttgttgaagtagtgcaacacattgttgtacgt cgaacagattgtggcaccgttcgcggtatttctgtaagtcctcgaaatggaatgatggcg gacaggatttttatccaaacattaattggccgtgtattagcagatgatatatatataggt tcgcgatgcattgctactagaaatcaagatattggggttggacttgtcaatagattcata acttttagagcacaaccaatctctattcgaaccccctttacttgtaggagtacatcttgg atttgtcaattatgttatggccggagtccagctcatgacgacctggtcgaattgggagaa gctgtaggtattattgcaggtcaatctattggagaaccgggtactcaattaacattaaga acttttcatactggcggagtattcacagggggtactgcagaacatgtgcgagcccctttt aatggaaaaataaaattcaatgaggatttggttcatccgacacgtacacgtcatggacat cctgcttttctatgttctagagacttatatgtaactattgagagtgaagatattatacac aatgtgtgtattccgcccaaaagttttcttttagttcaaaacgatcaatatgtagaatca gaacaagtcattgctgagattcgcgcgagaacatccactttgaatttgaaagagaaggtt cgaaaacatatttattctgactcagagggcgaaatgcactggaataccgatgtgtaccat gcacctgaatttacatatggtaatattcatctcttaccaaaaacaagtcatttatggata ttattaggggagccctggagatctagtctaggcccctgttcgatccacaaggatcaagat caaatgaacgcttattctctttctgttaagcgaagatatatttctaacccctcagtaact aataatcaagtgagacacaaattttttagttcgtatttttctggtaaaaataaaaaagga gataggattcctgattattcagaacttaatcgaatgacatgtactggtcgttgtaatctc agatatccgggcattctcgacgggaattctgatttattggcaaagaggcgaagaaataga gtcatcatcccactcgactcgattcaagaaggcgagaaccaactaataccttcttcaggt atctcaattgaaatccccagaaatggtattctccgtagaaatagtattcttgcttatttc gacgatcctcgatatataagaaagagctcgggacttactaaatatgagactagagagctg aattcaatcgtcaacgaagagaatttggttgagtatcgaggagtcaaggtattttggcca aaatatcaaaaggaagtcaatccatttttttttattcccgtggaagtccacattttggcc gaatcttcttccataatggtacggcacaatagtattattggggtagatacacaaatcact ttaaatagaagaagtcgggtaggtggattggtccgagtgaagaaaaaagcagaaaaaatt aaactgataatcttttctggagatatccattttcctggaaagacaaataaggcattccga ttgataccaccgggagggggaaaacaaaattccaaagaatacaaaaaattgaaaaattgg ctctatatccaacgaatgaaactttccaggtatgaaaaaaagtattttgttttggttcaa cccgtagtcccatataaaaaaacggatggtataaatttaggaagacttttcccagcggat ctcttgcaggaaagtgataatctacaacttcgagttgtcaattatatcctttattacgac ccaattcttgaaatttgggacacaagtattcaattagttcggacttgtttagtgttgaat tgggaccaagacaaaaagatcgaaaaggcctgtgcttcctttgttgaaataaggacaaat ggtttgattagagattttctaagaatcgacttagcgaagtcacctatttcatataccgga aaaaggaacgatctgccgggttcaggattgatctctgagaatggatcagatcgcgctaat ggcaatccgttttcttccatttattcctattccaaggcaacgattcaagaatcccttaat ccaaaccaaggaactattcatacattgttgaatcgaaataaggaatctcaatctttgata attttgtcatcatccaattgttctcgaataggcccattcaacgatgtaaaatatcccaat gtgataaaagactcaatcaaaaaggaccccctaattccaattaggaattcgttgggcccc ttaggaacaggctttccaatttatcatttcgatttattttcccatttaataacccataat cagatcttggtaacgaactatttgcaacttgacaatttaaaacagatttttcaaatactt aaatattatttactggatgaaaatggtaaaatttataatccctattcatgcagtaacatc attttgaatccattcaaattgaattggtattttctccattacaattattgtgaagagaca tctacaatcgttagtcttgggcagtttctttgtgaaaatgtatgtatagccaaaaaagga ccgcatttaaaatcaggtcaagttctaattcttcaagttgactctgtggtaatacgatca gctaagccttatttggctactccaggagcaactgttcatggacattacggggaaatcctt tacgaaggagatacattagttacatttatatatgaaaaatcaagatctggtgatataacg caaggtcttccaaaagtggaacaggtgttagaagtgcgttcgattgattcaatatcgatg aatcttgaaaagaggattgagggttggaacaaatgtataacaagaattcttggaattcct tgggcattctttattggtgctaagctaactatagtgcaaagtcgtatctctttggttaat aaggtccaaaaggtttatcgatcccagggggtgcagatacataataggcatatagaaatt attgtacgtcaaataacatcaaaagtgttggtttcagaagatgaaatgtctaatgttttt tcgcccggagaactaattggattgttgcgagcggaacgaatggggcgcgctttggaagaa gcgatctgttaccaagccgtcttattgggaataacaagagcatccatgaatactcaaagt ttcatatccgaagcgagttttcaagaaaccgctcgagttttagcaaaagcagctctccta gggcgtatcgattggttgaaaggcctaaaagaaaacgttgttctgggggggatgatacct gttggtagcggcttcaaaacaccttcaagcgaacctaacaacattcctaacaacattgcc tttgaactcaaaaaaaagaatctattagagggggaaatgaaagatattttgttctaccat agaaaatga

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