Halobacterium salinarum NRC-34001: LJ422_00855
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Entry
LJ422_00855 CDS
T07949
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJ422_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanr03400
]
LJ422_00855
Enzymes [BR:
hanr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LJ422_00855
DNA repair and recombination proteins [BR:
hanr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LJ422_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UEB92217
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All DBs
Position
159655..160482
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AA seq
275 aa
AA seq
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MRVGAHVSIAGGVDNAVTNELDVGGNCGQIFTHSPQVWQDPNIGADEAAAFREGTAADLD
GPWVIHSSYLVNLCTPKDDLRAKSIDSMQAEVDAAHTLGIPYVNVHLGAHTGAGVDDGLD
NAASALDELDIPDDVTVLIESDAGSGTKLGGDFEHLHEVLTRSDQDLDVCIDTAHAFAAG
YDLSTEAAVNDTLAAFDDVVGLDHLQYVHLNDSKHACGTNKDEHAHIGEGHIGEAGMRAF
INHDAIADVPLVLETPHEDGRGFAWNIDRVRDLRA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcggtgcacacgtctccatcgcgggtggtgttgataacgccgtcacgaacgag
ctcgacgtcggcgggaactgcgggcagatcttcacgcactccccgcaggtctggcaggac
ccgaacattggtgccgacgaagcggcggcgttccgcgagggcaccgcggcggacctcgat
ggcccctgggtcatccactcgtcgtatctcgtgaacctctgcacgcccaaagacgacctc
cgcgcgaaatccatcgacagcatgcaggcggaggtcgatgccgcacacaccctcggcatc
ccatacgtcaacgtccacctcggcgcacacacgggcgccggcgtggacgacggtctcgac
aacgccgcgtccgccctcgacgagctcgacatccccgacgacgtgaccgtcctcatcgag
agcgacgccggctccggcacgaagctcggcggtgacttcgagcacctccacgaggtgttg
actcgctccgaccaggacctcgacgtctgcatcgacaccgcccacgccttcgccgcgggc
tacgacctctccaccgaggcggcggtcaacgacaccctcgcggcgttcgacgacgtggtc
ggcctcgaccacctgcagtacgtccatctcaacgactccaagcacgcctgcggtacgaac
aaggacgaacacgcccacatcggcgagggacacatcggcgaggcgggcatgcgcgcgttc
atcaaccacgacgccatcgccgacgttccgctggtgctggagacgccccacgaggacggc
agaggcttcgcgtggaacatcgaccgcgtccgcgacctccgggcgtaa
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