Halobacterium salinarum NRC-34001: LJ422_01480
Help
Entry
LJ422_01480 CDS
T07949
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hanr
Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hanr03036
]
LJ422_01480 (smc)
Chromosome and associated proteins [BR:
hanr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LJ422_01480 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
Crescentin
AAA_29
AAA_13
ATG16
DUF724
DUF1664
Fez1
DUF4200
CENP-F_leu_zip
NPV_P10
MscS_porin
TPR_MLP1_2
Fib_alpha
AAA_27
Exonuc_VII_L
FPP
FliJ
Knl1_RWD_C
Filament
APG6_N
FapA
Motif
Other DBs
NCBI-ProteinID:
UEB92335
LinkDB
All DBs
Position
complement(270542..274114)
Genome browser
AA seq
1190 aa
AA seq
DB search
MYIEELVVENFKSFAGTTRIPFYEDFTTISGPNGSGKSNIIDAILFALGLARTTGMRAET
LTDLIYNPAHEGADGAAGPTEASVEVVLNNDAGVVSRSQVTTAAGSENVGSVDTITIKRR
VKRTDDSHYSYYYLNDRSVNLADIQELLAQAGIAPEGYNVVMQGDVTGIINMTAGERREI
IDEIAGVAEFDAKKRDAFEELDVVEERIGEAELKIDEKRDRLDRLADERETALEYQDLQE
EKQEYEGYAKAAELEETRADLSATRADIDEQERELEGLTAELDERRDTVGRIEADLAALN
AEIERKGEDEQLAIKREIEEIKGEVSRLEDTVAACEDRVQDADAERREAVVEIDRKRERI
DALETDIREVKVQKASVTAEIQERRDELADIEAEIESVDTEFDELKAALADEKTALEDAK
RERNDHQREQDRLLDEAKRRSEELADAEADLEDARAELPEVDATLDELADELEKATRNRE
QIVDVVEDLKQEKRQRQEDLAAVEDELSAAQEEYARLEAQADQSGDSSYGKAVTTVLNDD
RDGVHGTVGQLGGVREQYATACETAAGGRLANVVVDDDGVGQRCIEYLKQRNAGRATFLP
ITEMQQRSLPSAPAMPGVVDFAYDLVDFDERYAPVFSYVLGSTLVVENMETARDLMGEFR
LVTLAGDLVEKSGAMTGGSRSGSRYSFSKSGKGQLERVAERIQGLEDDREDCRQEVREID
QRLDSARDRRQDATEQVRTIQADIEAAEADREAAVERIADLETRIEELQDEREAVDAEMQ
TVDAEIDAQQETIAAIEAEIESLEAELAESRIPELTAEKEDIEATVVDLEGRVDELDGEL
NSLTLEKEYAEDAVEDLQADVADAESRKADEQARIEALNGDIEAKQAELAEKEAAVEDLE
AELADLKRDREERKADLSEAEDARDEQAAAVEDARHRLERLQAAAQTLSEEVAELDDAVG
EYDPAEIPDADVVAENVERLGARMEALEPVNMLAIDEYESVADTLDSLEAQRATLTEEAD
GIRERIARYDEQKKSTFMAAFEAINDHFHRIFSRLSAGTGGLELETPDDPFDGGLTMKAQ
PGDKPVQRLDAMSGGEKSLTALAFIFAIQRHTPAPFYALDEVDAFLDAVNADRVGELVDE
LAGDAQFVVVSHRSAMLDRSERAIGVTMQADNRSIVTGIDLSAQGAVTDD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtacatagaggaactcgtcgttgagaacttcaagagcttcgcagggaccacccgaatc
ccgttctacgaggacttcacgacgatcagtggtcccaacggctccgggaagtcgaacatc
atcgacgccatactgttcgcgcttgggttggcccgcaccaccgggatgcgcgccgaaacg
ctcactgatctcatctacaaccccgctcacgagggcgctgatggagccgcggggccgacg
gaggccagcgtcgaagtcgtgttgaacaacgacgcgggcgtggtctcccggtcgcaggtg
accaccgccgccggctccgagaacgtcggcagcgtggacaccatcacgatcaagcgccgc
gtcaagcgcaccgacgacagccactactcgtactactacctgaacgaccggtcggtgaac
ctcgcggacatccaagagctgctcgcgcaggccgggatcgccccggagggatacaacgtg
gtgatgcagggtgacgtcactggcatcatcaacatgaccgccggcgagcgccgcgagatc
atcgacgagatcgcgggtgtcgcggagttcgacgcgaagaagcgcgacgcgttcgaggag
ttggacgtcgtcgaggagcgcatcggggaggcggagctgaagatcgacgagaagcgcgac
cgcctcgaccgcctcgccgacgagcgcgagaccgccctcgaataccaggacctgcaggag
gaaaaacaggagtacgaggggtacgccaaggccgccgagttggaggagacgcgcgccgac
ctgtcggcaacgcgggcggacatcgacgaacaggaacgcgagttggaggggctcaccgcc
gagttggacgagcgccgcgacaccgtgggccgcatcgaagcggatttggcggcgttgaac
gccgagatcgagcgcaagggtgaggacgaacagctcgcgatcaagcgcgagatcgaggag
atcaaaggcgaggtgtcgcggctcgaagacacggtcgcggcctgcgaggatcgcgtccag
gacgcggacgccgagcgccgagaggcggtcgtcgagatcgaccgcaaacgcgagcggatc
gacgcccttgagaccgacatcagggaagtgaaagtccagaaggcgtcggtgaccgcggag
atccaggagcgccgcgacgagctcgccgacatcgaagccgagatcgagtccgtggacacc
gagttcgacgagctgaaagccgcgctcgcggacgagaagaccgccctggaggacgccaaa
cgcgagcgcaacgaccaccagcgggagcaagaccgactgctggacgaggccaaacgccgc
agcgaggagctggccgacgccgaggccgacttggaggatgcccgggccgagctccccgag
gtggacgccacgctggacgagctcgcggacgaactggagaaggcaacgcggaaccgcgag
cagatcgtcgacgtggtcgaggacctcaaacaggagaagcgccagcgccaagaggacctc
gcggcggtcgaggacgagctgtcggcggcccaagaggagtacgcgcgcctggaggcgcag
gccgaccagtcgggagactcctcgtacgggaaggcggtgacgacggtgctgaacgacgac
cgggacggcgtgcacggcactgtcggccagttgggtggcgtgcgcgagcagtacgcgacc
gcctgcgagacggctgcgggcgggcggctggcgaacgtggtggtggacgacgacggcgtc
gggcagcgctgcatcgagtacctcaagcagcgcaacgccggccgcgcgacgttcctcccg
atcaccgagatgcagcagcggtcgctgccgagcgcgccggcgatgcccggcgtggtggac
ttcgcgtacgacctcgtggacttcgacgagcggtacgcgccggtgttctcgtacgtgttg
gggagtacgctggtcgtggagaacatggagaccgcacgcgacctgatgggcgagttccgg
ctcgtgacgctggcgggcgatctcgtcgagaaatccggtgcgatgaccggggggagtcgg
tcggggtcgcggtattcgttttcgaaatccgggaaggggcaactcgaacgggtcgccgag
cgcatccagggtctcgaagacgaccgcgaggactgccgccaggaggtccgcgagatcgac
cagcgcctggattcggcgcgggaccgccgccaggacgccaccgagcaggtgcggacgatc
caggccgacatcgaggccgccgaggccgaccgggaggccgccgtggagcgcatcgcggat
ctcgaaacgcgcatcgaggagctgcaggacgagcgcgaggccgtcgacgcggagatgcag
accgtcgacgcggagatcgacgcacagcaggagacgatcgcagccatcgaggccgagatc
gagtcgttggaggcggagttggcggagtcgaggatccccgaactcaccgccgaaaaggaa
gacatcgaggcgaccgtcgtggacctagagggtcgtgtcgacgagctcgatggcgagctg
aacagcctcacgctcgaaaaagagtacgccgaggacgccgtcgaggacctccaggctgac
gtggccgacgccgagagccggaaagccgacgagcaggcgcgaatcgaggcgttgaacggc
gacatcgaggccaagcaggcggagctcgctgagaaggaggcggcggttgaggacctcgaa
gccgagctggcggacctgaaacgcgaccgcgaggagcgcaaggccgacctcagtgaggcc
gaagacgcccgcgacgagcaggcggccgcggtcgaggacgcacgacaccgcctggagcgc
ctgcaggcggcagcgcagacgctcagcgaggaggtcgcggagctggacgacgccgtcggg
gagtacgatccggcggagattccggacgccgacgtggtcgcggagaacgtcgaacgcctc
ggcgcgcgcatggaggcgttggagccggtgaacatgctcgcgatcgacgagtacgagtcg
gtcgccgacaccctcgatagcctggaggcgcagcgagcgacgctcaccgaggaggccgac
gggattcgggagcgcatcgcgcgctacgacgagcagaagaagtcgacgttcatggcggcg
ttcgaggcgatcaacgaccacttccaccgcatcttctcgcggttgtcagccggcaccggc
gggctcgaactcgaaacccccgacgaccccttcgacggggggttgacgatgaaggcacag
cccggggacaaacccgtccagcggttggacgcgatgagcggcggcgagaagtcgctgacc
gcgctggcgttcattttcgccatccagcgccacacccccgcgccgttctacgcgctggat
gaggtggacgcgttcctcgacgcggtgaacgcggatcgcgtcggcgagctcgtggacgag
cttgcgggcgacgcgcagttcgtcgtggtcagccatcggtcggcgatgctcgaccgctcc
gagcgcgccatcggggtgacgatgcaggctgacaaccgcagcatcgtcaccggcatcgac
ctctcggcgcagggggcggtcacggatgactga
DBGET
integrated database retrieval system
