Halobacterium salinarum NRC-34001: LJ422_01595
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Entry
LJ422_01595 CDS
T07949
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LJ422_01595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanr03021
]
LJ422_01595
03019 Messenger RNA biogenesis [BR:
hanr03019
]
LJ422_01595
Transcription machinery [BR:
hanr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
LJ422_01595
RNA polymerase I system
LJ422_01595
Messenger RNA biogenesis [BR:
hanr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
LJ422_01595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
DUF6093
Motif
Other DBs
NCBI-ProteinID:
UEB92357
LinkDB
All DBs
Position
complement(293637..294074)
Genome browser
AA seq
145 aa
AA seq
DB search
MSVFAVKTTASQEQTVASMIANREEDTIHAVLAPDALTSYVMVEAEDTAAIERTMDEIPH
ARSLVPGESGISEVEHFLSPKPDVEGIAENDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgttcgcagtgaaaaccaccgccagccaggagcagaccgtcgcgagcatgatc
gcgaaccgcgaggaggacacgatccacgccgtgctcgcgcccgacgcgctgacgagctac
gtgatggtggaggccgaggacacggccgccatcgagcgcacgatggacgagatcccacac
gcccggagtctcgtcccgggtgagtcggggatctcggaggtcgagcatttcctctcgccg
aaaccggacgtcgagggcatcgccgagaacgacatcgtcgagctcatcgccggcccgttc
aaaggcgagaaggcccaggtgcagcgcatcgacgagggcaaagaccaggtgaccgtggag
ttgtacgaggcgacggtgccgatccccgtgaccgtccggggcgaccagatccgcgtcttg
gacagcgaagagcggtag
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