Halobacterium salinarum NRC-34001: LJ422_03035
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Entry
LJ422_03035 CDS
T07949
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LJ422_03035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanr03021
]
LJ422_03035
Transcription machinery [BR:
hanr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LJ422_03035
Prokaryotic type
Archaeal type
TFB
LJ422_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Trm112p
Sigma70_r4
Cyclin_N
HTH_Tnp_ISL3
DUF7129
HTH_DeoR
A2L_zn_ribbon
Zn_Ribbon_YjdM
Auto_anti-p27
Zn_ribbon_19
DZR
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
UEB92638
LinkDB
All DBs
Position
complement(556507..557484)
Genome browser
AA seq
325 aa
AA seq
DB search
MSDSTIRTYSSDQRQTDNDETVSTPDEDVLTCPECGGQVIDDEEHGESVCVDCGLVVEEN
GIDRGPEWRAFNSTEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSNQRQKMQ
RLRKWNERFRTRNSKERNLKQALGEIERMASALGLPKEVRETASVIYRRALSEDLLPGRS
IEGVATAALYASARQLSTPRSIDEVANVSRIDEMEFKRTYRYIVRELSLEVAPADPAQYV
PRFASDLDLPDEVERRSRELISNAQADGVTSGKSPVGLAAAAIYASSLLTNHKVTQSEVS
EVTDVSEVTIRNRYQELLEATEAAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagtacaatcagaacatacagcagcgaccagcgccagacagacaacgacgag
acagtatcgacccccgacgaagacgtcctgacctgcccggagtgtggcgggcaggtcatc
gacgacgaggagcacggcgagtcggtctgtgtcgactgcgggctcgtcgtcgaggagaac
ggcatcgaccgcggccccgagtggcgcgcgttcaactccacggagaaagacgagaaatcc
cgcgtgggcgccccgaccacgaacatgatgcacgacaaggggttgtccacgaacatcggc
tggcaggacaaggacgcctacgggaacagtctctccagcaaccagcgccagaagatgcag
cgcctgcgcaagtggaacgagcgcttccgcacccgcaacagcaaggaacgcaacctcaag
caggcgctcggcgagatcgagcgcatggcctccgcactcgggctgcccaaggaggttcgg
gagaccgcgtcggtgatctaccgccgcgcgctcagcgaggacctgctgcccgggcgctcc
atcgagggcgtcgccaccgccgccctgtacgcgtccgcgcgccagctcagcacgccacgc
tccatcgacgaggtggcgaacgtcagccgcatcgacgagatggagttcaagcgcacgtac
cgctacatcgtccgggagctcagcctcgaagtcgcgcccgccgaccccgcgcagtacgtg
ccgcggttcgcaagcgacctcgacctccccgacgaggtcgagcggcggtcccgagaactc
atctccaacgcccaggccgacggcgtcaccagcggcaagtcgccggtcggactggccgcc
gcggcgatctacgcgtccagcctcctcaccaaccacaaggtcacccaaagcgaggtcagc
gaggtgaccgacgtcagcgaggtcaccatccgcaaccgctaccaggagctgctggaagcc
accgaagcagccgcctga
DBGET
integrated database retrieval system
