Halobacterium salinarum NRC-34001: LJ422_03130
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Entry
LJ422_03130 CDS
T07949
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LJ422_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanr03021
]
LJ422_03130
Transcription machinery [BR:
hanr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
LJ422_03130
Prokaryotic type
Archaeal type
TFE
LJ422_03130
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DUF7129
DNA_ligase_ZBD
Zn_ribbon_8
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UEB92655
LinkDB
All DBs
Position
576349..576867
Genome browser
AA seq
172 aa
AA seq
DB search
MAFEDLLDDPVVQKYLHELVGPKGMPVAAAPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFQYENVPGNLREEMDRLLEALVDRREYELENEFYLCE
VCSIRFEFGEAMDLGFECPECGSAVEAMENTDLVDAMDDRIERLRSELAVEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacttacttgacgaccccgtggtacagaagtacctccacgagctggtc
ggaccgaaggggatgcccgtcgcggccgcgccgccggacggcgaggtgaccgacgaggag
ctcgccgagcgactcgggctggagctcaacgacgtgcggcgcgcgctgttcattctctac
gagaacgacctcgcgacctaccgccgggtccgcgacgaggactcggggtggctcacgtat
ctctggacgttccagtacgagaacgtgccggggaacctccgcgaggagatggaccgactg
ctggaggcgctcgtcgaccgccgcgagtacgaactcgaaaacgagttctacctctgtgag
gtctgttcgatccgcttcgagttcggcgaggcgatggacctcgggttcgagtgtccggag
tgtggctccgccgtcgaagccatggagaacaccgacctcgttgacgcgatggacgaccgc
atcgagcgactgcgctcggaactcgccgtggaggcctaa
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