Halobacterium salinarum NRC-34001: LJ422_03550
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Entry
LJ422_03550 CDS
T07949
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LJ422_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanr03021
]
LJ422_03550
Transcription machinery [BR:
hanr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LJ422_03550
Prokaryotic type
Archaeal type
TFB
LJ422_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
Zn_ribbon_RRN7
HTH_Tnp_ISL3
Cyclin_N
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
UEB92735
LinkDB
All DBs
Position
complement(659595..660581)
Genome browser
AA seq
328 aa
AA seq
DB search
MTNQRTTRDGSHGTESVPTQRSRESTDEDHGCPECNGDLVTDEDRGETTCGECGLVVEED
GIDHGPEWRAFNAQEQDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNTLSGRQRRKMQ
RLRKWNERFRTRNSKERNLKQALGEIERMASAFGLPDSVRETASVIYRRALGEDLLPGRS
IEGVATSALYAAARQANTPRSLDEVASVSRVDRGEIARTYRYVARELSLEVAPTDPASYV
PRFCSDLELSGDVERRARDLLAAAADAGITSGKSPVGLAAASVYAAALLTNERVTQNEVS
TVANVSEVTIRNRYHEILDAGGEPGVEA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccagcgcacaacacgagacgggagccacggcacggaatcagtacccacgcag
cgcagccgtgagtccaccgacgaagaccacgggtgcccggagtgcaacggcgacctggtg
accgacgaggatcgcggggagaccacctgcggcgagtgcggcctcgtggtcgaggaggac
ggcatcgaccacggccccgagtggcgcgcgttcaacgcccaagaacaggacgagaaatcc
cgcgtgggcgctccgaccacgaacatgatgcacgacaaggggttgtccacgaacatcggc
tggcaggacaaagacgcctacggcaacaccctgtcggggcgccagcggcggaaaatgcag
cgcctgcgcaagtggaacgagcgcttccgcacccgcaacagcaaggaacgcaacctcaag
caggcgctgggtgagatcgagcgcatggcctccgcgttcgggctgccggacagcgtccgg
gagaccgcgtcggtgatctaccgccgcgcgctcggcgaggacctgctgcccgggcgctcc
atcgagggcgtcgccaccagcgcactgtacgccgccgcgaggcaggcaaacacgccccgc
agcctcgacgaggtcgcaagcgtcagccgcgtcgaccgcggcgaaatcgcgcgcacgtac
cgctacgtggcccgcgagctcagcctcgaagtcgcgccgacggatcccgcgagttacgtt
ccccggttttgctctgacctggagctgtccggcgacgtcgaacggcgcgcccgagacctg
ctggccgccgccgccgacgccggcatcacgtccgggaagtcgcccgtcggcctcgccgcg
gcgtccgtgtacgcggcggcgctgctcacgaacgagcgcgtcacgcaaaacgaggtcagc
accgtcgcgaacgtcagcgaggtcaccatccgcaaccgctaccacgagatcctggacgcg
ggcggtgaacccggcgtggaagcgtaa
DBGET
integrated database retrieval system
