Halobacterium salinarum NRC-34001: LJ422_04595
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Entry
LJ422_04595 CDS
T07949
Symbol
lrpA1
Name
(GenBank) HTH-type transcriptional regulator LrpA1
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
hanr
Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hanr03000
]
LJ422_04595 (lrpA1)
Transcription factors [BR:
hanr03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
LJ422_04595 (lrpA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
HTH_11
HTH_20
DUF7342
HTH_IclR
HTH_23
Fe_dep_repress
MarR
Rrf2
MarR_2
HTH_29
HTH_DeoR
AsnC_trans_reg_3
HTH_36
TrmB
DUF7343
GntR
HTH_5
HTH_28
HTH_Cmi2_C
LacI
DUF4143
HTH_Tnp_ISL3
FaeA
HTH_6
HTH_31
HTH_Crp_2
HTH_10
HTH_1
Sigma70_r4_2
MsrA_helical
HTH_Tnp_1
ArnB_C
HTH_45
HTH_32
Motif
Other DBs
NCBI-ProteinID:
UEB92936
LinkDB
All DBs
Position
complement(859461..859889)
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AA seq
142 aa
AA seq
DB search
MSTESTEERILAALEEDAQASYAAIAERADVSKPTVRKYIDQLESDGVIVGYSADVDPKK
LSGQSIAMVGIDVASEQYVEATRTLQELDSVQALYSSSGDHMLMAEVRAADGDALGDVIS
DEVLAIDGVTAAHPSFLQERLK
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactgaatcgacagaagagcgaatcctcgccgcgctcgaagaggacgcgcaagcg
tcgtatgcggccatcgcggagcgtgcggacgtctccaagccgaccgtccgcaaatacatc
gaccaactcgaatcggacggcgtcatcgtcggctactccgccgacgtcgaccccaagaag
ctgtccgggcaaagcatcgcgatggtcgggatcgacgtggcctccgagcagtacgtggag
gcgacccgcacactccaggaactcgactccgtgcaggcgttgtactcttcgagtggcgat
cacatgctgatggcggaggtacgggccgccgacggggatgcgctcggtgacgtgatcagc
gacgaggttttggctatcgacggcgtcacggccgcccacccctcgttcctccaggaacgc
ctcaagtga
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