Halobacterium salinarum NRC-34001: LJ422_05450
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Entry
LJ422_05450 CDS
T07949
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hanr
Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanr03400
]
LJ422_05450
Enzymes [BR:
hanr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LJ422_05450
DNA repair and recombination proteins [BR:
hanr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LJ422_05450
Prokaryotic type
LJ422_05450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Minor_capsid_2
Motif
Other DBs
NCBI-ProteinID:
UEB93096
LinkDB
All DBs
Position
complement(999690..1001135)
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AA seq
481 aa
AA seq
DB search
MQLFWHRRDLRTTDNRGLAAAAPGVTAVDGGHDQGPVAAVFCFDDEVLAHAAPPRVAFML
DALAALRERYRDLGSDLIVRHGDPAAVLPAVANDLDATRVVWNHDYSGLATDRDAGVRDA
LDAAGVAHAQFHDAVHHRPGEIRTNAGDPYSVYTYFWRKWQDREKNPPAPEPEPADLAAD
TALADTSPLPSVQELGFAEPEAAVPDAGTAAARSLLDAFRESGDIYRYEDRRDYPHEEPT
SRLSPHLKFGTIGIRTVYEAARAAKSDADTDDERENVAAFIGQLAWREFYAQVLYFNQNV
VSENFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAFLT
KDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDA
DYITEFVPELRDVPADAIHSWHELSLSERRRHAPEYPDPIVDHSQRREDAIAMFERARGD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgttctggcaccgacgggacctccgcaccacggacaaccgcggcctcgcagcg
gccgctccgggcgtgacagcggtcgacggcggccacgaccagggccctgtcgcggcggtg
ttctgcttcgacgacgaggtgttggctcacgccgccccgccccgggtcgcgttcatgctg
gacgcgctggccgccctccgggagcgctaccgcgacctcggcagcgacctcattgtccgc
cacggcgaccccgctgcggtgctcccggcggtcgccaacgatctcgacgccacccgggtc
gtctggaaccacgactactcggggctggccaccgaccgcgacgcgggcgtgcgcgacgcc
ctcgacgcggcgggcgtcgcacacgcccagttccacgacgccgtccaccaccggccgggc
gagatccgcacgaacgcgggcgacccgtactcggtgtacacgtacttctggcggaagtgg
caggaccgcgagaagaacccgccggccccggagccagagcccgcggatctcgcggccgac
accgcgctcgcggacaccagcccgctgccgtccgtccaggagctcggcttcgcggagccg
gaggcggcggtccccgacgccggaaccgcggcggcgcgatcgctgctcgatgccttccgc
gagtccggcgacatctaccgctacgaggaccgccgcgattacccccacgaggaacccacg
tcgcggctctccccgcacctgaagttcggcacgatcgggatccgaacggtctacgaggcc
gcacgcgcggcgaaatccgacgccgacaccgacgacgaacgcgagaacgtcgcggcgttc
atcggccagctcgcgtggcgggagttctacgcacaagtcctgtatttcaaccagaacgtc
gtctcggagaacttcaaagcgtacgagcaccccatcgagtggcgcgacgaccccgcggcg
ctgcaggcctggaaggacggcgaaaccggctatccgatcgtggacgccggcatgcgccag
ctccgcgcggaagcgtacatgcacaaccgcgtgcggatgatcgtcgccgccttcctcacg
aaagacctcctggtggactggcgggcgggctacgactggttccgggagaagctcgcggac
cacgacaccgccaacgacaacggcggctggcagtgggccgcctccacgggcaccgacgcc
cagccgtacttccgggtgttcaacccgatgacccagggggagcgctacgaccccgacgcc
gactacatcaccgagttcgtccccgaactccgggacgtgcccgcggacgcgatccacagc
tggcacgagctgtcgctgtccgagcgccgccgacacgccccggagtatccggaccccatc
gtggaccacagccagcgccgcgaggacgcgatcgcgatgttcgagcgtgcgcgcggcgac
gagtga
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