KEGG   Halobacterium salinarum NRC-34001: LJ422_05545
Entry
LJ422_05545       CDS       T07949                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hanr  Halobacterium salinarum NRC-34001
Pathway
hanr03030  DNA replication
hanr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hanr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LJ422_05545 (fen)
   03410 Base excision repair
    LJ422_05545 (fen)
   03450 Non-homologous end-joining
    LJ422_05545 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hanr03032]
    LJ422_05545 (fen)
   03400 DNA repair and recombination proteins [BR:hanr03400]
    LJ422_05545 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hanr04147]
    LJ422_05545 (fen)
DNA replication proteins [BR:hanr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LJ422_05545 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LJ422_05545 (fen)
DNA repair and recombination proteins [BR:hanr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LJ422_05545 (fen)
Exosome [BR:hanr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LJ422_05545 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc SPEF2_D5
Other DBs
NCBI-ProteinID: UEB91044
LinkDB
Position
complement(1018733..1019716)
AA seq 327 aa
MGNADLRQLAAIEETPFADLEGSVVAVDAHNWLYKYLTTTVQWTGADVYTTSDGTEVANL
VGAVQGLPKFFEHGLTPVFVWDGGVTELKDDEIADRREQRERYEEQLDDAREAGDAAEAA
RLDARTQRLTPTIHETTRELFDLLDIPQVEAPAEGEAQAAYMTRTDDAVDYAGSDDYDCL
LLGSPVTLRQLTSSGHPELMDFDATLAEHDLTWEQLVDVGILCGTDFNPGIDGFGPTTAL
DAIGEHGDLWDVLAAEGEHVAHGDRIRELFLNPDVTDDYVIDPDVSPAIDAARAFVTDEW
EVDADAVARGFERIDAAAAQTGLDRWT
NT seq 984 nt   +upstreamnt  +downstreamnt
atggggaacgcggacctccggcagctcgcggccatcgaggagactcccttcgcggacctc
gaagggagtgtggtggccgtcgacgcccacaactggctgtacaagtacctcaccacgacc
gtccagtggaccggcgcggacgtctacaccaccagcgacggcaccgaagtggcgaacctc
gtcggcgcggtgcagggcctgccgaagttcttcgaacacggcctcacgcccgtgttcgtc
tgggacggcggggtcaccgagctcaaagacgacgagatcgccgaccgccgcgagcaacgc
gagcgctacgaggaacagctcgacgacgcccgcgaggcgggcgacgccgccgaggcggcg
cgcctggacgcgcgcacgcagcgactcacgcccaccatccacgagaccacccgggagctg
ttcgacctgttggacatcccgcaagtcgaagcccccgcggagggcgaagcacaggccgca
tacatgacgcggacggacgacgccgtcgactacgcgggcagcgacgactacgactgcctg
ctgcttgggtcgccggtgacgctgcgccagctcacgagctccggccacccggagctgatg
gacttcgacgcgacgctcgccgaacacgacctgacgtgggagcaactcgtcgacgtcgga
atcctctgtgggacggatttcaaccccgggatcgacgggttcggaccgacaacggccctg
gacgcgatcggcgagcacggcgacctctgggacgtgctggcggccgaaggcgagcacgtc
gcccacggcgaccgcatccgggagctgttcttgaaccccgacgtgaccgacgactacgtg
atcgaccccgacgtgtcgccggccatcgacgcggcccgcgcgttcgtcaccgacgagtgg
gaggtcgacgccgacgcggtcgcccgggggttcgagcgcatcgacgccgcggccgcacag
accggcctcgaccggtggacgtga

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