Halobacterium salinarum NRC-34001: LJ422_05755
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Entry
LJ422_05755 CDS
T07949
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hanr
Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hanr03009
]
LJ422_05755
Ribosome biogenesis [BR:
hanr03009
]
Prokaryotic type
ribosomal protein modification factors
LJ422_05755
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
UEB91083
LinkDB
All DBs
Position
complement(1054849..1056603)
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AA seq
584 aa
AA seq
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MTDRGGADDGPVVAVVGDGPAVGAVESALADCAAAITDGVAGADLGVVVGVAGAAGVRGT
AATARQHDTPLVTVEVGGLGGVPLADVDAGVALLSPAGPCFECLCQRVEAAAPSRADDAA
ADRPAVRLAGAHAGRLAVDALRGTASPGTVIEVPHAERTVAPVPGCACAPADQDTAVPRD
GASLPLADALAAADPLVDDRVGIVSQVGERESFPTPYYLAHGADTSGFSDATAAQQAAGV
DQDWNAAYMRAVGEALERYSAGVYRTREFETHTPDHDAAVPPSAFVRPASGAAGDTTQWV
RGEHLQTGTDALLPAPRVVFPPPNPDSGHPITTGLGLGTAGADALLSGLYEVIERDATML
AWYSTFEPLALAVPLPSDTADDDTPADAFAALARRARAESLSVTPLLCTQDVDVPVVAVA
VHREAWPQFAVGSAADLNAEAAAADALAEALQNWMELRALGPEPASQESGAIGAYADRPP
AAEAFIDADTTVPVDTVGPADPPTDPASELTAVLDAVADAGLDAYGARLTPRDIDAAGFE
AVRVLVPAAQPLFVSEPRFGERARTVPSTLGFEPRLDRRFHPFP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgcggtggtgccgacgacggcccggtggtggccgtggtcggtgatgggccg
gcggtcggggccgttgagagtgcgctcgccgattgtgctgcggccatcaccgacggggtt
gcgggcgcggacctcggtgtggtcgtgggcgtcgcgggcgctgcgggggttcgcgggacg
gcggcgaccgcacgacagcacgacacgcccctggtgaccgtggaggtcggcgggctcggt
ggcgtcccgcttgccgacgtggacgccggtgttgcactgctctccccagcgggaccgtgt
ttcgagtgtttgtgccagcgcgtcgaggcagcggcgccgtcgcgcgccgatgacgcggcc
gctgaccggccggctgtccggctggcgggcgcgcacgccggccggctcgccgtcgacgcg
cttcgcggcaccgcatcgccgggcacagtgatcgaggtgccacacgccgagcgcacggtc
gcgcccgtacctggctgcgcgtgcgcgccggccgatcaggacacggcggtgccccgcgat
ggggcgtcgctgccgcttgcggacgcgctggcggcggccgaccccctcgtcgacgaccgc
gtcgggatcgtctcccaggtgggggagcgggagtcattccccacgccgtattatctggcc
cacggcgccgacacgtccgggttcagcgacgccacggcggcccagcaggccgccggtgtc
gatcaggactggaacgccgcgtacatgcgcgcggtgggggaggcgctcgaacggtacagc
gcgggcgtctaccggacccgcgagttcgaaacgcacacgccggatcacgacgccgccgtc
ccgccgtcggcgttcgtgaggccggcgtcgggtgccgccggtgacacaacccagtgggtg
cgcggcgaacacttgcagaccgggacggacgcgctgttgcccgcgccccgcgtggtgttc
ccgccaccgaacccggacagcggtcatcccatcacgaccgggctggggctcggcaccgcc
ggcgcggacgccctgctgtcggggctctacgaggtgatcgagcgcgacgccacgatgctg
gcgtggtattcgacgttcgagccgctggcgcttgcggtcccgctgccgtcggacaccgcc
gacgacgatacgccggccgatgcgttcgccgcgttggccaggcgtgcccgggcggagtcg
ctgtccgtgacgccgctgctgtgcacccaggacgtcgacgtgccggtggtcgctgttgcg
gtccaccgggaggcgtggccgcagttcgcagtggggtcggcggccgacctcaacgccgag
gcggcggccgccgacgcgctcgccgaagccctccagaactggatggagttgcgcgcgttg
gggcccgagccggccagccaggagtccggcgcgatcggcgcgtacgccgaccgaccgccc
gcggccgaggcgttcatcgacgccgacacgaccgtgcccgtcgacactgtggggccggcg
gacccgccgaccgacccggcgtcagaactcacggccgtcctggacgcggttgccgacgcc
ggcctggacgcctacggcgcgcgcctcacaccccgggatatcgacgccgccggcttcgag
gcggtgcgcgtgctggtgccggccgcccagccgctgttcgtctccgagccgcgcttcggc
gagcgcgcccgcaccgtgccgtcgacgctcggattcgagccgcgcctcgaccgccggttc
catccgttcccgtga
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