KEGG   Halobacterium salinarum NRC-34001: LJ422_06980
Entry
LJ422_06980       CDS       T07949                                 
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
hanr  Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:hanr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hanr03016]
    LJ422_06980
Enzymes [BR:hanr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LJ422_06980
Transfer RNA biogenesis [BR:hanr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LJ422_06980
 Prokaryotic type
    LJ422_06980
SSDB
Motif
Pfam: TruB_N TruB_C_2 DKCLD Pus10_C PUA DUF7344
Other DBs
NCBI-ProteinID: UEB91317
LinkDB
Position
1279323..1280228
AA seq 301 aa
MGIRPPPGERSPAAVLSFGVVNLDKPPGPSAHQVSAWIRDLVGVEKAAHAGTLDPKVTGC
LPVLTGTATRIAPALLEGFKEYVAVLELHDDPPRILPDVIEAFTGEIYQKPPKKSAVARR
LRTRTVYDLDVLDVDGRQVLLRIRCESGTYIRKLCHDIGRALGTNAHMGHLRRSATTPFD
DTDLVTLHDLADAVAWLRDTDDTEPPDAPADALRAAVQPAERALTHLPRLTIADSAAHEV
ATGAPVYAPGVIDTTALPTPPADGALVACYTAGGTAVCLGRLVGDPDADAGVVVALERVL
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atggggattcgaccgccacccggcgagcgcagcccggcggcagtgctgtcgtttggcgtc
gtgaacctggacaagccaccggggccgtcggcccaccaggtgtcggcgtggattcgagac
ctcgtgggcgtggagaaggccgcacacgccggcacgctcgatccgaaggtcacgggctgt
ctgcccgtgttgaccgggaccgcgacccggatcgcacccgcgctcctggaggggttcaag
gagtacgtcgccgtcctggagctgcacgacgacccgccgcgcatcctcccggacgtgatc
gaggcgttcaccggcgagatctaccagaagccgccgaagaaatccgcggtcgcgcgccgc
ctgcgcacccgcacggtctacgacctcgacgtgctcgacgtggacggccgccaggtcctg
ctccggatccggtgtgagtcgggcacgtacatccggaagctctgccacgacatcggccgc
gcgctcggcacgaacgcccacatggggcatctgcgccgcagcgccaccacgccgttcgac
gacaccgacctcgtcacgctgcacgacctcgcggacgcggtggcgtggctgcgcgacacc
gacgacaccgagccgccggacgcacccgcggacgcgctgcgcgcagcggtccagcccgcc
gagcgcgcgctcacgcacctgccgcggctcaccatcgccgactcggcagcccacgaggtc
gccacgggtgcgccggtgtacgcgccgggcgtcatcgacaccacggccctgccgacaccg
ccggcggatggggcgctggtggcgtgttacaccgcaggcgggacggcggtctgcctcggt
cggctggtcggcgatccggacgcggacgccggcgtggtcgttgccctcgaacgcgtgctc
gtgtag

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