Halobacterium salinarum NRC-34001: LJ422_08565
Help
Entry
LJ422_08565 CDS
T07949
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LJ422_08565 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hanr03019
]
LJ422_08565 (prf1)
03012 Translation factors [BR:
hanr03012
]
LJ422_08565 (prf1)
Messenger RNA biogenesis [BR:
hanr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LJ422_08565 (prf1)
Translation factors [BR:
hanr03012
]
Eukaryotic type
Release factors
LJ422_08565 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF7562
Zn_ribbon_8
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UEB91624
LinkDB
All DBs
Position
1568185..1569435
Genome browser
AA seq
416 aa
AA seq
DB search
MSEQDEVPSEDRRKYEFRKVIEELKDYEGSGTQLVTIYIPPDKQISDVVAHVTQEHSEAS
NIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLESPPQ
PIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLDRRESNVGWLKGKRVQPVKSAESLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVPKRHEIDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVSYTDESGLSDLVDAGQAALAEADLMDDKSDMEEFFEELNGGKL
ATYGFEQTRRNLIMGSVDRLLVSEDLREDVVIYECPNDHEEYETIDRRNTSPEHTCSDCG
EEATEVDREDAIDHLMSIADQRGTETHFISTDFEKGEQLLTAFGGYAGILRYSTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggacgaggtaccgtccgaggaccgacgcaagtacgagttccgcaaggtc
atcgaggagctcaaagactacgagggcagcggcacccaactggtcaccatctacatcccc
ccggacaagcagatctcggacgtcgtggcccacgtcacccaggagcactccgaggcctcc
aacatcaaatccaagcagacacgcaccaacgtccaggacgccctcacgtcgatcaaagac
cgactgcgctactacgacacgttccccccggacaacgggatggtcgtgttctcgggcgcg
gtcgactccggcggcggccgcacggacatggtcacggaagtcctggagtcgccaccccag
cccatcgagtcgttccgctaccactgcgactcggcgttcctcaccgaacccctcgcggag
atgctcggcgacaagggcctctacgggctgatcgtcctcgatcgccgcgagtcgaacgtc
ggctggctgaagggcaagcgggtccaaccggtgaaatccgcggagtccctggtgcccgga
aaacagcgcaagggcggccagtccgcccagcggttcgcccggctgcgcctggaagccatc
gacaacttctaccaggaggtcgcgggcatggccgacgacctcttcgtgccgaagcgccac
gagatcgacggcatcctcgtgggcggcccgtcaccaacgaaagacgagttcctcgacggg
gattacctccaccacgagctccaggacaaggtcctggggaaattcgacgtgtcgtacacc
gacgagtccgggctgtcggatctggtcgacgcggggcaggcggcgctggcggaagccgac
ctgatggacgacaaatccgacatggaggagttcttcgaggagctcaacggcggcaagctc
gccacctacgggttcgagcagacgcgccgaaacctcatcatgggctcggtcgaccgcctg
ctggtctccgaggacctccgcgaggacgtcgtcatctacgagtgccccaacgaccacgag
gagtacgaaaccatcgaccgccggaacaccagccccgagcacacgtgttcggactgcggc
gaggaggccaccgaggtcgaccgcgaggacgccatcgaccacctcatgtcgatcgccgac
cagcgcggcacggagacgcatttcatctccacggacttcgagaagggcgagcaattgctg
accgcgttcggcgggtacgccgggattttgcggtactcgaccggcgtgtag
DBGET
integrated database retrieval system
