Halobacterium salinarum NRC-34001: LJ422_08815
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Entry
LJ422_08815 CDS
T07949
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LJ422_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanr03021
]
LJ422_08815
Transcription machinery [BR:
hanr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LJ422_08815
Prokaryotic type
Archaeal type
TFB
LJ422_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
PHF5
DZR_2
FYVE
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UEB91672
LinkDB
All DBs
Position
complement(1617277..1618140)
Genome browser
AA seq
287 aa
AA seq
DB search
MQHPHRCPECDGTIRETDTEHVCADCGLVVTDAPIDHGPEWRTFSDDPDHAPERTGAPLT
RSRHDRGLSTEIGYSARLTGRKRRKFARLRRQHKRATIPSKADYNRIYGFTEIRRLIGTF
GIGTGLRDQACTLFASAQTAGLLHGRTIEGFAAAGVYATCRTNGVTRTLDEIAAAARATR
PELTTAYDAMNRDLGLPTGPIDPREYLPRYADALSLPARIERQARELVAALETDGLVAGR
NPSGVAAGCLYTAATETDHAVTQSAAAAVADVTPVTLRATYQNLTDA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatccacaccgctgccctgaatgcgacggcaccatccgcgaaaccgacaccgag
cacgtctgtgccgactgcgggctcgtcgtcacggacgcgcccatcgaccacgggcccgag
tggcggacgttctccgacgaccccgatcacgcacccgagcgtaccggcgcgccgctcacc
cgctcccggcacgaccgcggcctctcgaccgagatcggctacagcgcacggctcacgggc
cgcaaacgccgcaagttcgcacggctccgccgtcaacacaagcgcgccacgatcccctcg
aaagccgactacaaccggatctacgggttcacggagatccgccgcctcatcggcacgttc
ggcatcggcaccgggctccgcgaccaggcctgcacgctgttcgcgtccgcccaaacggcg
ggcctgctccacggccgcaccatcgaggggttcgcggccgccggcgtctacgccacctgt
cggaccaacggggtcacccgcaccctcgacgaaatcgccgccgccgcccgcgccacccgc
cccgagctcaccaccgcctacgacgccatgaaccgtgatctcgggctgccgaccggcccc
atcgacccccgcgaatacctcccacgatacgccgacgccctctccctgccggcccgcatc
gagcgccaggcccgcgaactcgtcgccgcactcgaaaccgacggcctggtcgccggccga
aaccccagcggcgtcgccgccggctgcctctacaccgccgcaaccgagaccgaccacgcc
gtcacgcagtcggccgccgcggccgtcgccgacgtcacgccggtgacgctgcgcgcgacc
taccagaacctcactgacgcctaa
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