Halobacterium salinarum NRC-34001: LJ422_08925
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Entry
LJ422_08925 CDS
T07949
Name
(GenBank) endonuclease NucS
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hanr
Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hanr03032
]
LJ422_08925
03400 DNA repair and recombination proteins [BR:
hanr03400
]
LJ422_08925
Enzymes [BR:
hanr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LJ422_08925
DNA replication proteins [BR:
hanr03032
]
Prokaryotic type
DNA Topoisomerases
LJ422_08925
DNA repair and recombination proteins [BR:
hanr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJ422_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Cupin_6
HypA
Zn_ribbon_4
ADH_Fe_C
Motif
Other DBs
NCBI-ProteinID:
UEB91694
LinkDB
All DBs
Position
complement(1640504..1641232)
Genome browser
AA seq
242 aa
AA seq
DB search
MQDAIRVLAGECAVRYENDASTDRVLRGDVVVVVKPDDTVLVHDADGYQPAAWLTRPGVV
RYTRDASGFRIDAADGDERLVVESATEHGDAHYPVSPAGPPVGRCECGGAFVRDGGRVVC
VDCRDQYSIPRDVAVVDDACAACGLPRIRVARGVTVTACVDRDCEPIAAAVADAIDWTCR
CGAALGVASERGLHAACESCGARFRLPHGTTAGDCGCGLPAIRTATGVRCLDGDCERAPQ
SL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgccatccgagtgctggccggggagtgtgcggtgcgctacgagaacgacgcg
tccaccgaccgcgtgctgcgcggcgacgtggtggtcgtggtgaaacccgacgacaccgtg
ttggtgcacgacgccgacggctaccagccggcggcgtggctcaccaggcccggtgtcgtg
cggtacacgcgcgacgccagcgggttccgcatcgacgccgccgacggcgacgagcgcctc
gtcgtcgagagcgcgaccgagcacggcgacgcccattatccggtgtcgcccgcggggccg
cccgtggggcgctgtgagtgtggcggcgcgttcgtccgcgacggcggccgcgtggtgtgt
gtggactgccgcgaccagtattcgatcccgcgcgacgtggcggtcgtcgacgacgcgtgt
gcggcctgcgggctgccgcggatccgggtggcgcgcggcgtgacggtgaccgcctgcgtg
gaccgcgactgcgagccgatcgcggccgcggtcgccgacgccatcgactggacgtgtcgc
tgcggggcggcgctcggggtggcgtccgagcgcggactgcacgccgcctgcgagtcctgc
ggggcgcggttccggcttccccacgggacgaccgccggcgactgtgggtgtgggttgccc
gcgatcaggaccgccaccggcgttcggtgtctggacggcgactgcgagcgcgcaccgcag
tcgctttga
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