KEGG   Halobacterium salinarum NRC-34001: LJ422_09050
Entry
LJ422_09050       CDS       T07949                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hanr  Halobacterium salinarum NRC-34001
Pathway
hanr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hanr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LJ422_09050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hanr03000]
    LJ422_09050
   03021 Transcription machinery [BR:hanr03021]
    LJ422_09050
Transcription factors [BR:hanr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    LJ422_09050
Transcription machinery [BR:hanr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     LJ422_09050
  RNA polymerase III system
    TFIIIB
     LJ422_09050
  RNA polymerase I system
    SL1/TIF-1B
     LJ422_09050
SSDB
Motif
Pfam: TBP T4bSS_IcmS
Other DBs
NCBI-ProteinID: UEB91718
LinkDB
Position
1670463..1671023
AA seq 186 aa
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHESLRIVFDKLRELSIKVEDDPEIVVQNIVTSADLGRQLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPKDAEHAVDKITSRLE
ELGLLD
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaccgaccccaaggaaaccatcaacattgaaaacgtggtcgcctccaccggcatcggg
caggagctcgatctccagagcgtggcgatggacctcgagggcgctgactacgaccccgag
cagttccccggcctggtctaccgcacgcaggacccgaaaagcgccgcactcattttccgc
tcgggcaagatcgtctgcacgggcgcgaaatcaaccgacgacgtacacgagagcctccgc
atcgtcttcgacaagctccgcgagctctcgatcaaggtcgaagacgaccccgagatcgtc
gtccagaacatcgtcacgtccgctgacctcggccgccagctgaacctcaacgccatcgcc
atcgggctgggcctcgagaacatcgagtacgagcccgagcagttccccgggctcgtctac
cgtctcgacgaccccgaggtcgtggcgctgctgttcggctccgggaagctcgtcatcacc
ggcggcaaagagccaaaggacgccgagcacgccgtcgacaagatcacgtcccggctcgag
gagctggggctcctcgactag

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