KEGG   Halobacterium salinarum NRC-34001: LJ422_09105
Entry
LJ422_09105       CDS       T07949                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hanr  Halobacterium salinarum NRC-34001
Pathway
hanr03030  DNA replication
hanr03410  Base excision repair
hanr03420  Nucleotide excision repair
hanr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hanr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LJ422_09105
   03410 Base excision repair
    LJ422_09105
   03420 Nucleotide excision repair
    LJ422_09105
   03430 Mismatch repair
    LJ422_09105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hanr03032]
    LJ422_09105
   03400 DNA repair and recombination proteins [BR:hanr03400]
    LJ422_09105
DNA replication proteins [BR:hanr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LJ422_09105
DNA repair and recombination proteins [BR:hanr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LJ422_09105
   MMR (mismatch excision repair)
    Other MMR factors
     LJ422_09105
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    LJ422_09105
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: UEB91728
LinkDB
Position
complement(1678618..1679361)
AA seq 247 aa
MFKAIVSADTLQETLDSVSVLVDECKIHLDDDTLSIRAVDPASVGMVDLDLAATAFESYE
ADGGLIGVNLSRLEDIAGMADAGQLIQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLPAHVAIEGRDIDRAVTAADMVSDHIALGVDTGDDLFYVNAEGDTDDVHLELAP
DQLIDLDAGDAHSLFSLDYLKDMNKAIPTTAEVELELGDEFPIKLHFDIADAQGHVTYML
APRIQSN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggcgatagtaagcgccgacacgctccaggagacactcgactccgtgagcgtg
ctggtggacgagtgcaagatccacctcgacgacgacaccctctccattcgcgcagtcgac
cccgccagcgtcggcatggtcgacctcgatctcgccgccactgcgttcgaatcctatgaa
gccgacggcggcctcatcggcgtcaatctctcccggctggaggacatcgcgggcatggcc
gacgccggccagctcatccaactggaactcgacgaggaaacccgcaagctccacatccag
atcgacggcctcgaatacacgcttgcgctcatcgaccccgactcgatccgccaggaaccg
gacatcccggacctcgatctgcccgcgcacgtcgccatcgaaggccgcgacatcgaccgc
gcggtcaccgccgccgacatggtctccgaccacatcgcgctcggcgtcgacaccggcgac
gacctgttctacgtcaacgccgaaggcgacaccgacgacgtccacctcgaactcgcgccc
gaccagctcatcgacctcgacgccggcgacgcccacagcctgttcagcctcgactacctc
aaggacatgaacaaggccatcccgacgaccgcggaggtcgaactcgaactcggcgacgag
ttccccatcaagctgcacttcgacatcgccgacgcacaaggccacgtcacgtacatgttg
gccccgcgcatccagtccaactga

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