Halobacterium salinarum NRC-34001: LJ422_09450
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Entry
LJ422_09450 CDS
T07949
Name
(GenBank) PAS domain-containing protein
Organism
hanr
Halobacterium salinarum NRC-34001
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
GAF_2
PAS_8
PAS_3
GAF_3
HATPase_c
Response_reg
HisKA
GAF
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
UEB91793
LinkDB
All DBs
Position
complement(1740919..1744824)
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AA seq
1301 aa
AA seq
DB search
MTTLDAGAASPVHVLYVNDDDDFAELTRRKLQSAPASFTVTTVGTAADALARLDESAIDC
VVTSYSLPDTTGIDLLERIHDTDHDPPTILFTGRGSERIASEATRAGVSDYLPIHAGQRS
FELLARRVRTLTEAARKETVAEEMSDRFRRTLERSTDAVYAVDEDWRIEYMNETMADRID
RDRDAVVGTVLWEEFPSLVGTPLEEQYRTAMETGESVSSEQRLGAPFDYWVDVRAFPDDD
GLTVFSQEITDEREQALALERSETILRHIHDVVFVVDDAGVVEFANAAAQRVIGGTQSAP
LVGHHLPTIIEDRGSTADATSVSDAIDSTLAELESDGGTAGFYDVNLPIDFDAGTDTRTL
DVRFTPFRTAADRQVLVVGRDITEQSDVRRHLERERDALREIQRVVAETELSVDERLEAL
LAVGCQALGLEIGIVSHIHGEQYTVKAAHTSGVDIAPGDEFDLATTYCESVVGSDAVCSF
SDATADGRETHPAYEELGLQSYVGAPLIVDGDRYGTINFSSPATRVADFDAIEETLVELL
AELVSAELSRGRDRAELQRRQFLFERIQETANVGVFEYAPSTGSLEWSDGVRRIHGVDPG
YEPSFDDAIDAYHPDDRETIAAAVDRALDEGEPYDLDLRIVRPDGVVRDVRAWGERVDSP
QHGARTLRGVIQDITGRKSREREHKALAEEYEALLETSGDAIFLLDVDTTGDEPRFEFAR
LSPGYEAQTGLETAAVKGKTPREVFGDEQGSEVAANYRRCVDEGAPISYREELDVGPDAR
FWDTGLAPVVVDGEIVRIVGIARNVTDQVERERSLEATNQRLESLIEATPLAVMEIDPDG
TVTRWNDEAESMFGWTREEVVGEFNPVVPDSQRDEFEDHRQRVLGGERIRGMELRRRTKS
GGDLDVLLSAAPVPGADGETTSLLAVLEDITPQKQLEAKLRALQETARRLTSAQSSAAVG
EIAVEVAADVLGYDLTAVWEHDEQSASLVPLAATGATREAFDDIPTLQSGDSLAWDAFES
AELHVYDDLEHQSDLVASGTPLESGLFVPLGGFGVLGVGATAGQTFSDTDVDLFRILGST
VAAALARATRETELQRQNERLDQFASVVAHDLRNPLSVATGFLDIVADTGELEYLDRIES
AHDRMARLIDDLLTLASGESTVTDAECVDLHAVTTESWGYVDTAEATLCVRDDLRTVSGD
GSRLTQLFENVFRNAVEHGGAAVTVTVGQLGDREGFYVADDGDGIPEDERGDVLDHGVTS
SDAGTGFGLSIVEDIAKAHGWAVVVTAGADGGARFEFETDP
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctggacgccggtgcagccagcccggttcacgtgctgtacgtgaacgacgac
gacgacttcgctgaactcactcgcaggaagctccagagcgcgccggcatcgttcaccgtc
accacggtggggaccgcagccgatgcactcgcccggctcgacgaatcggcaatcgactgc
gtcgtcacgtcgtactcgctgccggacaccacggggatcgacctcctcgaacggatccac
gacaccgaccacgatccgccaacgatcctgttcactggccggggcagcgagcggatcgca
agcgaggcgacgcgcgcgggcgtctccgactacctcccgattcacgccggccagcgcagc
ttcgagttgctcgcgcgccgcgtccggacgctcaccgaggcagcccgcaaggagacggtc
gccgaggagatgtcggaccggttccgacggacgctcgaacgctccacggacgccgtctac
gccgtcgacgaggactggcgcatcgaatacatgaacgagacgatggccgaccgcatcgac
cgtgatcgtgacgccgtggtcggcaccgtactctgggaggagttcccctcgctggtcggg
acgcccctggaagaacagtaccgcacggcgatggaaaccggcgagtcggtgtcgtccgaa
cagcgcctcggcgcgcccttcgactactgggtcgacgttcgggcgttccccgacgacgac
gggttgaccgtgttctcccaggagatcaccgacgagcgcgagcaggccctggcgctggag
cgcagcgagacgatcctccgccacatccacgatgtcgtgttcgtcgtcgacgatgcgggc
gtcgttgagttcgccaacgccgccgcacagcgcgtgatcggcggcacacagtccgcgccg
ctggtcggccaccacctgccgacgatcatcgaggaccgcggcagcaccgccgacgccacg
agcgtttcggacgcgatcgactcgacgctggcggaactcgaaagcgacggcggcaccgcc
ggcttctacgacgtcaacctgcccatcgacttcgacgccggcaccgacacccgcacgctc
gacgttcggttcacgccgtttcggactgcggccgaccgccaggtcctggttgtcgggcga
gacatcaccgagcaaagcgacgtgcggcgacacctcgaacgcgaacgggacgcactccgg
gagatccagcgcgtcgtggctgagacggaactgtccgtcgacgaacgcctcgaagcgctg
ctggcggtggggtgtcaggcgttgggcctggagatcgggatcgtgtcccacatccacggc
gagcagtacaccgtcaaagccgcacacacgtccggcgtcgacatcgcgcccggcgacgag
ttcgatctggcgacgacgtactgtgaatcagtcgtcggcagtgacgccgtctgttcgttc
agtgacgccaccgccgatgggcgcgagacccatcccgcctacgaggagctcggcctccag
tcgtacgtcggcgcgccgctgatcgtggacggcgaccgctacgggacgatcaacttctcc
agtccggccacgcgggtcgccgacttcgacgcgatcgaggagacgctcgtcgagttgctg
gcggaactcgtcagcgcggaactctcccggggccgcgaccgcgcggaactccagcgtcgc
cagttcctcttcgagcgcatccaggagaccgccaacgtcggtgtgttcgagtacgccccg
tcgacggggtcgctcgagtggtccgacggcgtccgccggatccacggcgtcgatccgggg
tacgagccgtcgttcgacgacgcgatcgacgcctaccatcccgacgaccgggagacgatc
gcagcggccgtcgaccgcgcgctcgacgagggggagccgtacgacctcgatctccggatc
gtgcgcccggacggcgtggtgcgtgatgtccgcgcgtggggcgagcgcgtcgacagccca
cagcatggcgctcggacgctgcggggagtgattcaggacatcaccgggcggaagtcccgg
gagcgcgagcacaaagcgctcgccgaggagtacgaggcgctcctggagacgtccggtgac
gcgatcttcctgctcgacgtcgacaccaccggcgacgagccgcgcttcgagttcgcgcgg
ctcagccccggctacgaggcccaaaccggcttggagacggcggcggtcaaagggaagacg
ccgcgggaggttttcggcgacgaacagggcagcgaggtcgccgcgaactaccgccgctgt
gtcgacgagggcgccccgatctcgtaccgcgaggagttggatgtcggcccggacgcccgg
ttctgggacacggggttggcgccggtggtcgtcgacggcgagatcgttcgcatcgtcggc
atcgcgcgcaacgtcaccgaccaggtcgagcgcgagcgcagcctcgaagcaaccaaccag
cgcctggagtcgctcatcgaggcaaccccgcttgcggtgatggagatcgacccggacggc
acggtcacgcgctggaacgacgaggccgagtcgatgttcgggtggacccgcgaggaggtg
gtcggcgagttcaatccggtcgttccggacagccagcgcgacgagttcgaggaccaccgc
cagcgcgtcctgggcggcgagcggatccgtgggatggagctgcgccgccggacgaagtcg
ggtggcgacctggatgtgctcctgtccgccgcgccggtcccgggcgctgacggggagacg
accagcctcctcgccgtgcttgaggacatcactccccagaagcaactggaggcgaagctg
cgcgccctccaggagaccgcgcggcggctcacgagcgcgcagtcgagcgcggcggtgggt
gagatcgccgtcgaggtggcggccgacgtgctcgggtacgacctcaccgccgtctgggag
cacgacgagcagtcggcgtcgttggtgccgctcgccgcgacgggcgccacgcgggaggcg
ttcgacgacatcccgaccctgcagtccggcgacagcctcgcgtgggacgccttcgagtcc
gcggagctgcacgtgtacgacgacctcgaacaccagtccgatctggtggcgtcggggacc
cccctggaaagcggcctgttcgtgcccctcggcgggttcggtgtcctcggtgtgggggcg
accgccgggcagacgttctcggacaccgacgttgatctgttccggatcctggggtcgacc
gtggcagcggcgctcgctcgcgcgacccgggagaccgaactgcagcgacaaaacgagcgc
ctcgatcagttcgcgagcgtcgtcgcccacgacctccggaaccccctctcggtcgccaca
gggttcctggatatcgtcgcggacaccggggagttggagtacctcgaccggatcgagtcc
gcccacgaccgcatggcgcggctcatcgatgacctgctcacgctggccagcggcgagtcg
acggtcaccgacgccgagtgcgtcgacttgcacgcagtgacgaccgagtcgtggggctac
gtcgacacggccgaggcgacgctgtgcgtccgcgacgacctccgcactgtgtccggcgac
ggcagccgactgacccaactgttcgagaacgtgttccggaacgccgtcgaacacgggggt
gctgctgtcacggtgacggtcggccagctcggcgaccgcgaggggttttacgtcgccgac
gacggcgacgggatccccgaagacgagcgcggcgacgtgctcgatcacggcgtcacctca
agcgacgccggcaccgggttcgggctgtcgatcgtcgaggacatcgccaaagcccacggt
tgggcggtcgtcgtgacggcgggcgcggacggcggcgcgcgcttcgagttcgagaccgat
ccctga
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integrated database retrieval system
