Halobacterium salinarum NRC-34001: LJ422_09540
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Entry
LJ422_09540 CDS
T07949
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJ422_09540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hanr02000
]
LJ422_09540
Transporters [BR:
hanr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LJ422_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
UEB91811
LinkDB
All DBs
Position
1765500..1767461
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AA seq
653 aa
AA seq
DB search
MANRDNHARPSRPNTDQSTSEAHSRRRVLKALGATGVAAGVAGCLGGGSDDSAATATSEE
TSSPDTETLQPENIPRGGTFKVATTSTTNGLNAFRIGDGQTSARVNSVMDAGFSRTGEAY
EDILPLWFEDFSVSEPVDQIEITLRDNLEYGNGYGELTADDYLWNLNNLWRPDWTAFTYS
HLFNVGADNTPITFEKVDKYTIRETIPEPRPFFPYNEPLGGMYPIPKALAKPYVEAEDAD
GLEQDEEVMRAAFNGNLGPWDLKRWSQQSVMAFERAEDYYLRQWAKRDDRVPEVMANAPY
FDEFHMQYFNKASTAREALKGGEIDRVSIPSTDVPEFRDQGGIELYKNPYRSWSGYLGIN
HRANGWTQLRNKKVRHAMAHIYHNEFIVENILNGRAGVQNTLHPTWGPYAPENPTTFSGS
LDEARRLLKEGTSNDYGYSGDTFVGPDGNQVELTIVYQSGQTDDLRAAYLKKRLGKVGIK
LNQETTSWPNLMSNYFKTTETAPGFSGEPGYGDENRQPSDYNRGPQDEAVSAQPWDFMLT
LGFDYGPNTPASTITNLFGTEQSFNSYGYAPDRDLVGMRDAAQTAASRDAAKAKITEMLE
YLSEERPVIFEYNPYNFYAYNDSVENIPDSPANDYYVEERYSEMYFSDGASGR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatagagacaaccatgcgagaccatcacgaccaaacacggatcagtccaccagc
gaggcgcactcgcggcggcgggtgctgaaagcgctcggcgcgaccggggttgcggcgggc
gtcgcgggctgtctgggcggcggcagcgacgactcggcggcgaccgcgaccagcgaggag
acgtcgtcgccggacaccgagacgctgcaacccgaaaacatcccgcggggtgggacgttc
aaggtggcaacgacgtcgacgacgaacggcctgaacgcgttccggatcggtgacggacag
acctccgctcgcgtcaattcagtgatggatgcggggttctcgcggaccggggaggcgtac
gaggacatcctgccgctgtggttcgaggacttctcggtgtccgagcccgtcgaccagatc
gagatcacgctccgggacaacctcgaatacggcaacggctacggggagttgaccgccgac
gactacctctggaacctcaacaacctctggcggccggactggacggcgttcacctacagt
cacctgttcaacgtcggggctgacaacaccccgatcacgttcgagaaagtcgacaagtac
acgatccgagagacgatcccggagccgcgaccgtttttcccgtacaacgaacccctcggc
gggatgtacccgatcccgaaagcgctcgcgaagccgtacgtcgaggccgaggacgccgac
ggcctcgaacaggacgaggaggtgatgcgggctgcgttcaacggcaacctcgggccgtgg
gatctcaagcgctggtcccagcagtcggtcatggccttcgagcgggctgaggactactac
ctccggcagtgggcgaaacgcgacgaccgcgtgcccgaggtgatggcgaacgcgccgtat
ttcgacgagttccacatgcagtacttcaacaaagcgagtacggctcgtgaagcgctgaaa
ggcggggagatagaccgagtgagtatcccctccacggacgtcccggagttccgcgaccag
ggcggtatcgagctgtataagaacccgtaccggtcgtggtccgggtatctggggatcaac
caccgtgcgaacggctggacgcagctccggaacaagaaggtccggcacgcgatggcgcac
atctatcacaacgagttcatcgtcgagaacatcctcaacgggcgggccggcgtccagaac
acgctgcatccgacctgggggccgtacgcgcccgagaaccccacgacgttctcggggtcg
ctggacgaagcgcgccgcctcctcaaggagggcacctcgaacgactacgggtacagcggc
gacaccttcgttggaccggacggcaaccaggtcgagttgaccatcgtctaccagtccggg
cagaccgacgacctgcgggcggcctacctgaaaaagcgcctcgggaaggtcggcatcaag
ctgaaccaggaaacgacgtcgtggccgaacctgatgagtaactacttcaaaacgacggag
acggcgccaggcttctcgggggagcccggatacggcgacgagaacaggcagccgtccgac
tacaaccgcggcccacaggacgaagcggtgtcggcccagccgtgggacttcatgctcaca
ctcggcttcgactatggaccgaacacgcccgccagcacgatcacgaacctcttcggcacc
gaacagtcgtttaactcctacggctatgcgccggatagagacctcgttggaatgcgtgat
gcggcccagacggctgcgagtcgcgacgccgcgaaggcgaagatcacggagatgctggag
tacctctccgaggagcggccggtgatcttcgagtacaacccgtacaacttctacgcgtac
aacgacagcgtcgagaacatcccggacagccccgcaaacgactactacgtcgaagagcgg
tattcggagatgtacttctccgacggagccagcggccgctaa
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