Halobacterium salinarum NRC-34001: LJ422_10565
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Entry
LJ422_10565 CDS
T07949
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hanr
Halobacterium salinarum NRC-34001
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hanr03009
]
LJ422_10565
Ribosome biogenesis [BR:
hanr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
LJ422_10565
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Fer4_RLI
SMC_N
AAA_16
AAA_29
Fer4_6
Fer4
AAA_23
AAA_24
Fer4_7
NACHT
Fer4_9
Fer4_21
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
UEB92004
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Position
complement(1952743..1954575)
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AA seq
610 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECSNYCPPNRTGKECITLRGEDAGDGDPDQVHISEEICL
GESCGICVEKCPFDAIEIINLPQELDDQPTHRYGENSFSLYGLPVPESGKVTGLLGPNGI
GKSTAVDLLAGEVTPNLGRHESPPDWDEVVDEYRGTELQDYLAAVRDGDVDVAKKPQYVD
EIPAQFDGNTRQLLEATDERGVLDDLVDRLSIRPVMDQAIDSLSGGELQRVALAATLARD
ADFYFVDELTPYLDIGQRVTAARLVRELAEDADKAVLVVEHDLAVLDMLADSIHVAYGEP
SVYGVVTPPKSVRNGINEYLRGYLENENMRVRPEAIEFEEHAPRSASRRDTLVSYPDMTK
SYGDGEFTLSVEGGDINRNEVLGVVGPNGIGKSTFAQLLAGGLEPSSVGGEAGAALDVGL
DIAYKPQYVEADQQMRVDAFLSSVTDDVGTSYWQTEIADPLQLDPIMEQRLPDLSGGERQ
RVAIAATLSKDADLYLLDEPSAHLDVEQRVLATRAIRRFAENNESTVMVIDHDIYMIDLV
SDRLMVFDGEPAEHGQASPPQAMRSGMNEFLANLDVTFRRDERLGRPRINKPDSQLDKQQ
KRDGEYYYTT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagcatcgcggtcgtcgacctggatcggtgtcagccggaccggtgtaac
tacgagtgttcgaactactgcccgccgaaccgcaccggcaaagagtgcatcacgctccgc
ggcgaggacgccggggacggcgaccccgaccaagtccacatcagcgaggagatctgtctc
ggggagtcctgtgggatctgcgtcgagaaatgtccgttcgacgccatcgagatcatcaac
ctcccccaggagctcgacgaccagccgacccaccgctacggggagaactccttctcgctg
tacgggctgccggtgccggagtccgggaaggtcaccggcctgcttggccccaacggcatc
gggaagtcgacggccgtcgacttgctcgccggggaagtgacgccgaacctcggccgccac
gagtcgccgcccgactgggacgaggtcgtcgacgaataccgcgggaccgagctccaggac
tacctggcggccgtccgggacggcgacgtcgacgtcgcgaaaaagccccagtacgtcgac
gagatccccgcacagttcgacggcaacacccgccagctgttggaggcgaccgacgagcgc
ggcgtgctcgatgacctcgtcgaccggctgtcgatccgtccggtgatggatcaggcgatc
gactcgctgtcgggcggggagctccagcgcgtcgcgctcgccgcgacgctcgcgcgggac
gccgatttctacttcgtggacgagctgacgccgtacctggacatcggccagcgcgtcacc
gcggcgcgcctcgtgcgggagctcgccgaagacgccgacaaggccgtgctcgtcgtcgag
cacgacctcgcggtcctggacatgctggcggactccattcacgtcgcgtacggtgagccg
tccgtctacggcgtcgtgacgccgccgaaaagcgtccgcaacggcatcaacgagtacctc
cgcggatacctcgaaaacgagaacatgcgcgtgcgcccggaggccatcgagttcgaggag
cacgcccctcggtcggccagccgccgggacacgctcgtgtcgtatcccgacatgacgaag
tcctacggcgacggcgagttcacgctgtccgtcgagggcggcgacatcaaccgcaacgag
gtgctgggcgtcgtcgggccgaacggcatcgggaagtcgacgttcgcgcagttgctcgcg
ggcggtctggagccgtcgagcgtcggcggcgaggcgggcgcggccctcgacgtggggctg
gacatcgcgtacaagccccagtacgtggaggccgaccagcagatgcgcgtcgacgcgttc
ctctcgtcggtcacggacgacgtggggacgagctactggcagaccgagatcgcggacccg
ctgcaactggatccgatcatggagcaacgcctgccggacctctccggcggggagcgccag
cgcgtcgccatcgcggcgaccctctcgaaggacgccgacctctatctgttggacgagccg
agcgcgcacctcgacgtcgagcagcgcgtgctcgcgacccgcgccatccggcggttcgcg
gagaacaacgagagcaccgtgatggtgatcgaccacgacatctacatgatcgatctggtg
agcgaccggctgatggtgttcgacggcgagcccgccgaacacgggcaggcgtcgcccccc
caggcgatgcgctcggggatgaacgagttcctcgcgaacctcgacgtgacgttccggcgc
gacgagcgcctcggccgcccgcgcatcaacaaacccgacagccagctcgacaaacagcag
aaacgcgacggcgagtactactacacgacgtga
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