Halobacterium salinarum NRC-34001: LJ422_11475
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Entry
LJ422_11475 CDS
T07949
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJ422_11475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hanr02000
]
LJ422_11475
Transporters [BR:
hanr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LJ422_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_14
AAA
Rad17
nSTAND_NTPase5
AAA_16
AAA_33
RsgA_GTPase
NB-ARC
AAA_19
PRK
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UEB93146
LinkDB
All DBs
Position
pHcu_235:complement(129453..130193)
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AA seq
246 aa
AA seq
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MARVTLDSIRKQYGETTAVDGVSLTVGDGEIVGLLGPSGCGKTTTLRTVAGFETPNTGTV
SFDDRDVTHVPPENRNVGLVFQEYALFDNMTVIENVTFGLKMRAVQRADRRERAHALLDM
LGIDDLADRDPMTLSGGQQQRVGLARALAIEPRVLLLDEPMTGLDAKLKARLRAEVSQLL
SELDVTGLYVTHDQEEAMLMCDRIAVMNDGRLEQVGSPQEVYESPATEFVSEFVALDAPE
LPFVQW
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgtcacactcgattcgatccggaagcagtacggcgaaacgaccgccgtcgac
ggtgtctcgctcaccgttggggacggcgagatcgtcggcctgcttggcccttcgggctgt
gggaagacgacgacgctgcgaactgtggcaggcttcgagacaccaaacaccggcacagtc
tcgttcgacgaccgagacgtgacacacgttccaccggagaaccgaaacgtcgggctagtg
ttccaggagtacgccctctttgacaacatgacggtcatcgagaacgtaaccttcggactg
aaaatgcgtgccgttcagagagccgaccgcagggaacgtgctcacgcactcctcgacatg
ctcggcatcgatgatctggccgaccgtgacccaatgacactctcgggtggccaacaacag
cgcgttggcctcgcccgcgcactcgccatcgagccacgcgtcttgctcctcgacgagccg
atgacggggctggacgcgaaactgaaggctcgactccgtgcggaagtcagtcagcttctc
tcggagctggatgtcaccggtctctacgttacccacgaccaagaggaggcgatgctgatg
tgtgatcgcattgccgtgatgaacgacggacgcctcgagcaggttgggtccccacaggaa
gtgtatgagtcgcccgcaacggagttcgtctcggagttcgtcgccctcgatgcgcccgaa
ctcccattcgttcagtggtag
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integrated database retrieval system
