Halobacterium salinarum NRC-34001: LJ422_11490
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Entry
LJ422_11490 CDS
T07949
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJ422_11490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hanr02000
]
LJ422_11490
Transporters [BR:
hanr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LJ422_11490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UEB93149
LinkDB
All DBs
Position
pHcu_235:complement(131980..133113)
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AA seq
377 aa
AA seq
DB search
MRTTRRSFIGASTTALLSGFAGCTSGGDDGANSSADAGMYTVGHDDFQTEISASAFPNML
YFYCVQSGWMNWPTIMDNVESKYGVAVHDDDRSSGEALQHMRSHSGDMTHSGYNGGYTYG
IIAKNDGFTQPYKPNGWEMVPDSLKTADGHVTATRRVTTAVTYRKDIYEERGLTAPTTWA
DLLQPEIMQDLALQTPQSAVGLAAALSINNARGGSMDDCQPVIDYYKTIQNGGAEFTDNF
LAQFSSGEYSTFIRYDYSGLNLKYNNTGIDEEDVGVTVLEGENGNQGAINMPYGYALLED
APNPEAGKLFMDYVLSLEGQQHFLDAYVRPIRSSELELPDEFIDSEEYDRTEFQVDYNRL
VEQQDEIIQEITRGATI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactactcgaaggtcgttcatcggcgcatccacgacagccctcctcagtggcttc
gccggctgcacgtcaggcggcgatgacggagcgaatagctcggccgatgctggcatgtac
actgtcggccatgacgactttcagacggagatcagtgcgtctgcgttcccaaacatgctc
tacttctactgcgtgcagtcagggtggatgaactggccgacaatcatggacaacgtcgag
tcgaagtacggtgtcgccgttcacgacgacgaccgctcgtcgggcgaggcactgcagcac
atgcgatcccactccggggacatgactcactccggatacaacggcgggtacacttacggg
atcattgcgaaaaacgacggcttcacgcagccctacaaaccgaacggatgggagatggtg
ccggactcactcaagacagccgacggccacgtgaccgccacacggcgtgtcacgactgcg
gtcacctatcggaaagacatctacgaggaacgcggcctcactgcgccgacaacctgggcg
gacctcctccagcccgagatcatgcaggatctcgcgctccagacaccccaatccgcagtc
ggtcttgcggcagcactttcgatcaacaacgcccgcggcggttcaatggacgactgccag
ccagttatcgactactacaagacgatacagaacggcggggcggagttcaccgacaacttc
cttgcacagttctccagtggggagtactcaaccttcatccggtacgactactccggactt
aatctcaagtacaacaacaccggaatagacgaggaggacgtcggtgtcacggtcctcgaa
ggtgaaaacgggaaccagggggcgataaacatgccctacggctacgcgctgctggaagac
gccccgaaccctgaagccgggaaactgttcatggactacgtcctctcactggaagggcag
caacacttcctcgacgcctacgtccggccgattcgctcgtcggagctggagttgcccgac
gagttcatcgacagcgaggagtacgacagaacagagttccaggtggactacaaccggctc
gtcgagcagcaagacgagatcatccaggagatcactcgtggcgcgaccatctga
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integrated database retrieval system
