Halobacterium sp. NMX12-1: ABSL23_01035
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Entry
ABSL23_01035 CDS
T10641
Name
(GenBank) bacterio-opsin activator domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hanx Halobacterium sp. NMX12-1
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hanx03000
]
ABSL23_01035
Transcription factors [BR:
hanx03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABSL23_01035
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
PAS_4
Response_reg
GAF
GAF_3
PAS_9
PAS
OKR_DC_1_N
GerE
HTH_11
Sigma70_r4
UPF0122
Motif
Other DBs
NCBI-ProteinID:
XCF15221
UniProt:
A0AAU8C8S8
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All DBs
Position
pNMX12-1_234:complement(197387..200260)
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AA seq
957 aa
AA seq
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MNPNSRSILDTSTIAVVGDTAWLTTYVDALQQQFDTTVHRVSTAPAARTTLRQTAIDCVV
TDYSLPETTGVDLVRSIRETTATLPVILGTADGSETIASTAIEADVTDYIAVTDPVDDTV
TDALQRTEQALRDAQRSMTQRDRARQFDATFHDARSATWVLGRDGALERVNQTARAMIDV
DADVVVGDRFWTLPWWPDESQTRTDIRRLIETAQRGEFGHAVVTRNGVTGERVLELSVQP
VTDERGDLVSIIVDSVDITDRVDLERELRRSEQLHRVTLNNMTDTVLMTDENGEYTYVCP
NVHFIFGYTAEEIRELGTIEALLGDDLFDREDLADDGVLKNIETTATDKAGREHTLLVNV
REVSIHDGTLLYSCRDITKRKQRERALATLQETARDFLYAETHQEIAQHVVDDAPDVLDL
DASAVYLFDADDNHLQPTAHSQAMRDAHGPLPDVHADGNDLTSHSFVENEPRFFADVHDA
DRLANPATDLRSVAYIPLGNHGVFVAGSTDVGAFDDVTRELADLLAATAEAALDRVDRES
QLREQDRELQQQNDQLTTLNQINETIREIDQALVQSETREEIDHTVCERLTADGRFQFAW
IGTLDSTTEAVTPQAWAGTDHGYLDTQSFPVAADAVEPAGRTAATGEVTLVSNVAADLRA
APWRKDAISRDLLSVLSIPLVYNDLSYGVLTVYAETPDAFDETIQTVLAELGETIASAIS
ASERKRALLTTSMTRVEYAVADLSFVLAQLAHAADCTVTYEGGVQQTASGNYVFVTVEDA
PLDAVVDVAAGLRVVEDVQRIRGGDTGGVLRLQLTEPFLATELADHGAVLQSATASQTGT
EFVIDVPGNAEARNVTQFVTQRFDDVELTAKQTREQASEHGFYASVLDSLTDRQLEVLET
AYYSGFFESPRTVTGEAVAESLDISPQAFYQHIRTVQQKLFAALIDEHAPVVSRRAD
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaaactcccggagcatcctcgatacgtctacgatcgccgttgtcggcgacacc
gcgtggctgacaacgtacgtcgatgcgctgcaacagcagtttgatacgaccgttcaccgc
gtctccacggcaccggcagcccgaacgacgctccgacagacggccatcgactgcgtcgtt
actgactacagtctccccgaaacgacgggagtcgacctcgttcgcagcattcgggagacg
accgcgacgcttccagtcattctggggaccgccgacgggagtgagacgatagccagcacg
gcaatcgaggccgacgtcaccgactacatcgccgttaccgacccggtcgacgacaccgtc
accgacgctctccagcgaaccgagcaggcgctacgggacgcccaacggtcgatgacacag
cgcgaccgtgcgcgacagttcgacgcgacgttccacgacgccaggtcggcgacgtgggtc
ctcgggcgcgatggcgcactcgagcgcgtcaaccagacggcccgcgccatgatcgacgtg
gacgccgacgtcgtcgtcggtgaccgcttctggacgctcccctggtggcccgacgagagc
cagacgcgcactgacatccgtcgcctcatcgagacggcgcaacgcggcgagttcgggcac
gccgtcgtcacccggaacggcgtcactggcgaacgcgtgctcgagctgtccgtccagccg
gtcaccgacgaacgcggcgacctcgtctcgattatcgtcgacagcgtcgacatcaccgac
cgcgtcgacctcgaacgggagctccgccggtccgagcaactccaccgcgtcacactcaac
aacatgaccgacaccgttctcatgaccgacgagaacggcgaatacacgtacgtctgcccg
aacgtccacttcatcttcggatacacggccgaggagattcgagagctgggaacgatcgaa
gccctgctgggcgacgacttgttcgaccgcgaggacctcgccgacgacggcgtcctcaag
aacatcgagacgacggccacggacaaagccggccgcgagcacacgctgctggtgaacgtt
cgtgaagtctcgattcacgacggcacgctgctgtacagctgtcgcgacatcacgaagcgc
aagcagcgcgaacgcgcactcgcgaccctccaagagaccgcgcgggacttcctgtacgcc
gaaacacaccaggagatcgcccagcacgtcgtcgacgacgcgcccgacgttctcgacctc
gatgcgagtgccgtctacctcttcgacgccgacgacaaccacctccagccgaccgcgcac
tcgcaggcgatgcgggacgcccacggccccctgccagacgttcacgcggacggcaacgac
ctcaccagtcacagcttcgtcgagaacgaaccccggtttttcgcggacgtccacgacgcc
gaccgccttgccaatcctgcgaccgacctccggagcgtcgcgtacatcccactcgggaac
cacggcgtgttcgtcgccgggtcgaccgacgtcggcgccttcgacgacgtgacgcgcgaa
ctcgcggacttgctggcggcgacggcggaagcagcgctggaccgcgtcgacagggagtcc
cagctccgcgagcaggaccgcgaactccagcagcagaacgaccagctcaccacactcaac
cagatcaacgagacgatccgcgagatcgaccaggcgctcgtgcaatcggagacccgcgag
gagatcgaccacacggtctgtgaacggctcaccgccgacgggcgcttccagttcgcctgg
atcggcaccctcgatagcacgaccgaggccgtgacgccccaggcgtgggcggggaccgac
cacggctatctcgatacgcagtcgttcccggtcgccgctgacgccgtcgaaccggcgggt
cggactgcggcgactggcgaggtgacgctcgtctcgaacgtcgcggccgatctccgggcg
gccccgtggcgcaaggacgcgatttcacgcgacctactatccgtgttgagcatcccgctc
gtctacaacgacctctcgtacggcgtcttgacggtgtacgcggagacgccggacgccttc
gacgagacgattcagacggtgctcgcggagctcggtgagacgattgcatccgcgattagc
gcgagcgaacgcaagcgagcgctgctcaccacgtcgatgactcgcgtcgagtacgcggtc
gccgatttgtcgttcgtgcttgcgcaactcgctcacgcggccgactgcacagtcacctac
gaggggggcgtccagcagactgccagcggtaattacgtgttcgtcaccgtcgaggacgct
ccgcttgacgcggtcgtcgacgtggcggccggtctccgcgtcgtcgaagacgtccagcgg
attcgcggtggcgacaccgggggcgtgttgcgacttcagttgaccgagccgttcctcgcg
acggaactggccgaccacggcgcggtcctgcagagtgcgaccgcgtcacagaccggaacg
gaattcgtcatcgacgtccccgggaacgctgaggccagaaacgtcacgcagttcgtcacc
cagcgcttcgacgacgtcgagctgacggcgaagcagacgcgcgagcaggcgtccgaacac
ggcttttacgcgtcagtgctggacagcctgactgacagacaactggaagtcctagagacg
gcgtactacagtggtttcttcgagtcgccgcggacagtgactggggaagctgtcgcggag
tcgctggacatctcgccgcaggcgttctaccagcacatccggaccgtccagcagaaactc
ttcgcggcgctgatcgacgagcacgcgccggtggtctctcgacgcgcggactaa
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