KEGG   Halobacterium sp. NMX12-1: ABSL23_01160
Entry
ABSL23_01160      CDS       T10641                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hanx  Halobacterium sp. NMX12-1
Pathway
hanx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hanx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ABSL23_01160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hanx03000]
    ABSL23_01160
   03021 Transcription machinery [BR:hanx03021]
    ABSL23_01160
Transcription factors [BR:hanx03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    ABSL23_01160
Transcription machinery [BR:hanx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     ABSL23_01160
  RNA polymerase III system
    TFIIIB
     ABSL23_01160
  RNA polymerase I system
    SL1/TIF-1B
     ABSL23_01160
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: XCF15245
UniProt: A0AAU8CAH9
LinkDB
Position
pNMX12-1_234:complement(223188..223748)
AA seq 186 aa
MSTLADTIEIQNVVASSDLGQELALDQLAIDLDGSEYRPDDFPGVVYRLQEPKSATLIFD
SGKVVCTGAQSIDDVHKALDIVFDDLQGLGIDVASDPPVEVQNVVSSASLEQSLNLNAIA
IGLGLEQVEYEPEQFPGLVYRLDDLDVVVLLFGSGKLVITGATDSEDAQHALGHVEDRLT
ELGLLE
NT seq 561 nt   +upstreamnt  +downstreamnt
atgagcacgctagcggacacaatcgaaatccagaacgttgttgcgtccagcgatctcggc
caagaactcgccctcgaccagctcgcgatagacctcgatggctctgaatacaggccggat
gactttcctggggttgtctaccgcctgcaggagccgaagtcagccacgctgatatttgac
tcggggaaagtcgtctgcaccggcgcgcaaagcatcgatgatgttcacaaagccctcgac
atcgtcttcgatgatctccaagggttagggattgatgtcgcgagcgatcctcccgttgag
gtgcagaatgtcgtctccagcgcgagtctggaacaatcgttgaacttgaatgcgattgcg
atcggcctgggcttagagcaagtcgaatacgaacccgagcagttccctgggctcgtctac
cgactcgatgacctcgacgtcgtcgtcctcctcttcggcagtggcaaactcgtgattact
ggtgcaacggactctgaggacgcccagcacgccttgggacacgtcgaagaccgccttact
gaactcggcctgcttgagtga

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