Halobacterium sp. NMX12-1: ABSL23_01465
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Entry
ABSL23_01465 CDS
T10641
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hanx Halobacterium sp. NMX12-1
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_01465
Enzymes [BR:
hanx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABSL23_01465
DNA repair and recombination proteins [BR:
hanx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ABSL23_01465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Cas_Cas4
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XCF16697
UniProt:
A0AAU8CDE8
LinkDB
All DBs
Position
44121..47735
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AA seq
1204 aa
AA seq
DB search
MPLLEVPEDVPSIFDDEPQTQVFEEYHEGSGRVVVGAGAGTGKTTTLIDTVAEAILQKLN
EEEGNPMDDLLITTFTKDAAGELKTKLKERLRVHEAASGEQLNTDIWRWIETDSYVETID
SFTHRLLREVAIEAGISPGFEVRDGLEEEDLYDEIMEEMRDQDDLEDSIARLEEAYPNED
WRAFPPDDLQDLLIRAHNKSREFCWTPEEMGERLMETHQQSHAELEPDFTVDEVREIAQE
LTGQFTFPGEDVAEHASEIYRHNQRLIEDFSRLLVEFDERYNDRTVEQGLLSHTDITYLV
WKQLNENPNSDWAEGLSERFDHVFVDEFQDTSFAQCRILAHCFQDSGERTNALLIGDVKQ
SIYQWRSADPRIFADIIDFAIEEDGDNEAPYLEIDGLAYLPLTTNFRSHPELVESANHIF
DSIFTDPGRGDIGPFNIPFEAATASRASEEPDWAANGNRLHVLDLGNSSSKSDWRQNEPV
RVAETVSGLIGDDQTPVLDEDETESLDEPVYRQPRAGDITLLFNRRSAMAPYAEMLREYG
VDCAIDVSKGLFNEPEIELLIEVLNWFANPHSKDSLIRILRSPVTALDDRTLRYLASEKY
YLTTALEDWPDELPENDESRLRGLIALRDDLRWEREKNKASLIQDIIQHTGFDSVVLAGE
DGKQKFANLWLVAEIVTEWEDEELLSYNEFVTRLKRLQSRANRGEDEHPLAKISDEESET
TVRLTTVHQSKGLEYPIVILPDLCYAPRDAWFPWNNRMMLSRDGVGLRPDIGDEQPVQYG
AGGSDFWITDDPNPTNPFAVDGLATTWITGTRSDTNGSISDDHPLAENYAATLAEFWRSL
YVAYTRAADHLFVGLSSSNRLPGPDEYSTWATSLTNLLKPDQLDNWQPGTFSREITYREL
DGVDEVSIGIDDIEPGEMRVDEEIGMEIVEESITQNRRHEVDELENEFFPSVVKPTSIHD
ILACPLRFQYSELEEVSAIRADIPPGSEPPGGLHPTQWGDIVHKLLENAVIGEEEAGEYA
EGYEQEIKNELLDTVLANFEGSEIGQSLTETDVTALPEHDVRVYVDELDTYVSGQLDLVY
EDSEGWHVVDFKTGRVADEDEYIGDSYRLQLAAYTWLFDKAYDVEIESAKLAYVHPSLEI
KSMDVSPSDFEDAITEVQQLLEIVPNQGLPATPDPTRDEISGDPPVSSKCGSCAYRSRCP
EWSD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcttgaagttccggaggacgtgccgtcgattttcgatgacgagccacaaact
caggtattcgaagaatatcatgaggggtcggggagggtagtcgtcggtgcgggagcgggc
actggcaagacgacgactctaatcgacaccgtcgcggaagcgattctccaaaaattgaac
gaagaagaaggaaatccgatggatgaccttctcataactacgttcacaaaggacgctgcc
ggtgaactcaagaccaaactgaaagagcgcctcagggttcacgaagctgcatccggcgag
cagctgaataccgacatctggcggtggatcgaaacggacagctacgtcgaaacgattgac
tcgttcactcaccgtttgctgcgagaagtcgctattgaagccgggatctcacctgggttc
gaggttcgtgatggactggaagaagaggacctgtacgacgagattatggaggaaatgcga
gatcaggatgatcttgaggactcaattgctcggctagaagaagcgtatcctaacgaggat
tggagagcatttccacccgacgatttgcaggatctactcatcagagcccacaataagagc
cgtgagttctgttggacccccgaagagatgggtgaacggttgatggaaacccaccagcag
tcacacgcagaacttgaacccgactttacagtagatgaagtccgagagattgctcaggaa
ctaactggccagttcaccttccccggtgaggatgtcgcagagcatgcgtcagagatatat
cggcacaaccaacgtctcatagaggacttcagcagattactcgtcgaatttgacgaacga
tacaatgacaggacagtcgagcaaggtctactctcgcacacagatattacgtatctggtc
tggaaacagttgaatgagaacccgaattctgactgggctgaaggacttagcgagcgattt
gatcacgtgttcgttgacgagttccaagacacgagctttgctcagtgccgaattctcgct
cattgctttcaggattctggcgagagaacgaacgccctgttgatcggtgacgtcaaacag
tcgatctatcaatggaggtctgcagatccccgcatctttgccgatataatcgactttgca
atcgaagaagacggtgataacgaagcgccgtatctcgaaatcgatggtctagcgtacctg
ccactaacgaccaatttccgaagtcacccggagcttgttgaatcggctaatcacatcttt
gatagtattttcacggaccctggaaggggggacattggcccgttcaacatcccatttgag
gctgcaactgcgagccgtgcatctgaggaaccagattgggcagcgaatggcaacagactc
cacgtactcgatctcggtaatagctcaagtaaatcggactggcgacagaacgaaccggta
cgagtcgctgagactgtcagtggactaatcggagacgatcaaacaccggttctcgatgaa
gacgaaactgaatccctcgatgagccagtatatcggcaaccccgtgccggcgacattacc
ctactattcaaccgaaggagtgcgatggcaccttatgctgagatgcttcgagagtacggg
gtggattgtgcgattgacgtctcgaaggggctattcaacgaaccagaaatcgaactattg
attgaagtattaaactggttcgcaaatccccactccaaagattcactaatccgcatcctt
cggtcacctgtcaccgctcttgatgaccgaacgctccggtacttagcgagcgagaagtac
tatctcacgactgcgttggaagattggccagacgagttgccggaaaacgacgaatcccgt
ctcagggggctgattgcactccgagatgacttgcgatgggaacgcgagaaaaacaaagca
tcgctcattcaggatattattcagcacacgggctttgattccgttgtcctcgctggtgaa
gatggaaagcaaaagttcgctaatctatggttggtagcggagatcgttaccgagtgggag
gacgaagaattactatcgtacaatgagtttgttacccggctcaaacgcctccaatcccga
gcgaaccggggggaagacgaacatccgcttgccaagatctctgacgaggagtccgaaact
acagtccgactcacgaccgttcaccaatcgaagggactggaataccctatcgtaatcctt
ccagacctgtgttatgcaccacgcgatgcttggttcccttggaacaaccggatgatgctt
agtcgggacggtgtgggtcttcgtcccgatattggcgatgagcagccagtccagtacggt
gcgggcgggtcggacttctggatcaccgacgatccgaatccgaccaacccattcgcagtt
gacggtctggccacaacgtggattactggaactaggagcgatacaaatggctcgatctcg
gacgatcatcctcttgctgaaaactacgcagcgactctagcggaattctggcgctctctc
tatgtggcctacacgcgggcagctgaccatctcttcgtcggtcttagcagtagtaaccgt
ctccctggaccggacgaatactctacctgggcaacgtctctgacgaatttactcaaaccg
gatcagcttgataattggcaaccggggaccttctctcgggagatcacctaccgcgaactt
gacggtgtcgatgaggtttcaatcggtattgacgacatcgagcccggggagatgagagtt
gacgaagaaattgggatggagatagttgaggagtctataactcaaaaccgacgccacgaa
gtagacgagttggagaatgaattcttcccgagcgttgtgaagccaacttcgatccatgat
atccttgcctgtccacttcgattccaatatagcgagcttgaggaagtaagtgcaattcgt
gctgatatccctccaggaagcgaaccaccaggaggactccatccgacacagtggggtgat
atcgtccacaagcttctggaaaatgctgtgattggcgaagaagaggcaggagagtacgca
gaaggatatgaacaggagattaagaacgagctcctggatacggttcttgcaaactttgag
ggatcagaaatcgggcagtccctcacagaaacggatgttaccgcactcccagagcatgat
gtgagggtatacgtagatgaattagacacatacgtttcgggccagctggatttagtatat
gaagattcggaaggctggcacgtagtggacttcaagacgggacgtgttgctgacgaagac
gagtatatcggtgactcgtatcgtcttcaactagccgcttacacctggttgtttgacaag
gcatacgatgttgagatcgaatctgcgaagttggcctacgttcacccgagcctcgaaatc
aaatcgatggacgtctcaccgtcggatttcgaggacgcgataacagaggttcaacaattg
ctggagattgtcccgaatcaagggctccccgcgacaccggatccgacgcgtgacgagatc
agcggagaccccccggtttcgtcaaagtgcggttcgtgtgcgtatcggtcgaggtgccct
gagtggagtgactaa
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