Halobacterium sp. NMX12-1: ABSL23_02835
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Entry
ABSL23_02835 CDS
T10641
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABSL23_02835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_02835
Enzymes [BR:
hanx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABSL23_02835
DNA repair and recombination proteins [BR:
hanx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABSL23_02835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XCF16964
UniProt:
A0AAU8CFZ7
LinkDB
All DBs
Position
259786..260382
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AA seq
198 aa
AA seq
DB search
MSDIDGMEGVEVTECTRCADLVESRSRIVNGDGPEDADVLFVGEAPGASEDEEGVPFVGR
SGDVLDDELRDAGLPRADVRITNCVRCRPPENRDPSREELANCRPYLEREIELVDPDVIV
TLGKVPGEHLLERDIAVTSEAGNVERVELGGEPREVLLCLHPAATLYDASQRETFTETIE
KAATIAGESSGQSQLGDY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgacggcatggagggcgtggaggtcacggagtgcacgcgctgtgcggac
ctcgtcgagtcccggagccgaatcgtcaacggggacggccccgaggacgccgacgtgctg
ttcgtcggggaggcgcccggggcgtccgaggacgaggagggcgtgccgttcgtcgggcgc
agcggcgacgtgctcgacgacgaactccgggacgcggggctgccgcgcgcggacgtccgc
atcacgaactgcgtgcgctgtcgcccgccggagaaccgcgaccccagccgagaggagctg
gcgaactgccggccgtaccttgaacgcgaaatcgagctcgttgaccccgacgtaatcgtc
acgctcgggaaggtccccggcgaacacctgctcgaacgggacatcgcggtgacgagcgaa
gcggggaacgtcgagcgcgtcgaactcggcggggagccgcgggaagtcctcctctgcctg
catccggcggcgacgctgtacgacgcgagccagcgcgagacgttcacggagacgatagag
aaggcggcgacgatagccggcgagagcagcgggcagtcccagctcggcgactactga
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