Halobacterium sp. NMX12-1: ABSL23_03660
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Entry
ABSL23_03660 CDS
T10641
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABSL23_03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanx03021
]
ABSL23_03660
Transcription machinery [BR:
hanx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABSL23_03660
Prokaryotic type
Archaeal type
TFB
ABSL23_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
DZR
RB_B
DUF8122
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
XCF17119
UniProt:
A0AAU8CDV5
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All DBs
Position
418664..419581
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AA seq
305 aa
AA seq
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MPTSDSYARGFDEDVQTTGNQCPECGGRVTTNVVETVCEDCGLVIDEQRIDHGPEWRSCT
DEKQRTGGPLTVARHDRGLSTEIGKHTDASGNTLSGRKRRQLGRLRREQSRGRFQSKAER
NLAHGLGEVRRISSALGLSETLRDQACQLFRSAQNENLLRGRSIEGIAAASVYGACRCTG
RSQTLDDVAVPARVEQSRVKNAYQTLNAELGLPAKPVQPSAFVPRLASELACPDDVRRQA
RTLAERAETTGVTAGVHPAGFAAACLYEALRERGRHPLKTRVAEAADVCVSTVRTHQQTV
RKLEL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgagtgacagctacgcgcgtggcttcgacgaggacgtacagactactggtaat
cagtgtcccgaatgtggcggtcgcgtcactacgaacgtcgtcgaaacagtctgcgaagac
tgcggactggttatcgacgaacagcgcatcgaccacgggccggagtggcggtcctgtacg
gacgagaaacagcggactggcggaccactcacggttgcacgtcacgaccgtgggctctcg
acggagatcgggaaacacactgatgcgagcgggaacacgctctcggggcggaagcgccgc
cagctcgggcggctgcgccgcgagcagtcccggggccgcttccagtcgaaagccgaacgt
aatctcgcccatggtctgggtgaggtgcgacgcatcagcagtgcgctgggcctctcggag
acgctccgcgaccaagcgtgccaactgtttcggagcgcacagaacgaaaacctcctacga
ggtcggtcgatcgaaggtattgccgcggcgagcgtctacggcgcgtgtcgctgtactggc
cggtcgcagacgctcgacgacgtcgcggtcccggcacgcgtcgaacagtcccgcgtcaag
aacgcctaccagacgctgaacgcggaacttggcttaccggcgaagccagtgcaaccgagc
gcgttcgtgccgcgcctcgcctccgagctcgcgtgtcccgacgatgttcgccgacaggcg
cggacgctcgcggaacgggccgagacgactggcgtgacagcgggcgtgcatccagccggc
ttcgccgcggcgtgcctctacgaggcactgcgtgagcgtggccggcacccattgaaaaca
cgggtcgcggaggcggccgacgtctgtgtgtcgacggtgcggacgcatcaacagacggtt
cgcaaactggaactgtag
DBGET
integrated database retrieval system
