KEGG   Halobacterium sp. NMX12-1: ABSL23_03995
Entry
ABSL23_03995      CDS       T10641                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hanx  Halobacterium sp. NMX12-1
Pathway
hanx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hanx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ABSL23_03995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hanx03000]
    ABSL23_03995
   03021 Transcription machinery [BR:hanx03021]
    ABSL23_03995
Transcription factors [BR:hanx03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    ABSL23_03995
Transcription machinery [BR:hanx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     ABSL23_03995
  RNA polymerase III system
    TFIIIB
     ABSL23_03995
  RNA polymerase I system
    SL1/TIF-1B
     ABSL23_03995
SSDB
Motif
Pfam: TBP T4bSS_IcmS
Other DBs
NCBI-ProteinID: XCF17184
UniProt: A0AAU8CFI2
LinkDB
Position
complement(483425..483985)
AA seq 186 aa
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHESLRIVFDKLRELSIEVEDEPEIVVQNIVTSADLGRQLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEHAVDKIVSRLE
ELGLLE
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaccgaccccaaggaaaccatcaatattgaaaacgtggtcgcctccaccggcatcggc
caggagctcgacctccagagcgtcgcgatggacttggagggggccgactacgaccccgag
cagttccccggcctcgtctaccgcacgcaggaccccaagagcgccgcgctcatcttccgg
tccggcaagatcgtctgcaccggcgcgaaatccaccgacgacgtccacgagagcctgcgc
atcgtcttcgacaagctccgcgagctctccatcgaagtcgaggacgaacccgaaatcgtc
gtccagaacatcgtcacgtctgcggacctcggccgccagctcaacctcaacgccatcgcc
atcggcctcggcctcgagaacatcgagtacgagcccgagcagttccccggcctcgtctac
cgcctcgacgagcccgaggtcgtcgcgctgctgttcggctccggcaaactcgtcatcacc
ggcgggaagaagcccgaggacgccgaacacgccgtcgacaagatcgtctcccggctcgaa
gagctcggcctcctcgaataa

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