KEGG   Halobacterium sp. NMX12-1: ABSL23_04325
Entry
ABSL23_04325      CDS       T10641                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hanx  Halobacterium sp. NMX12-1
Pathway
hanx03030  DNA replication
hanx03410  Base excision repair
hanx03420  Nucleotide excision repair
hanx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hanx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABSL23_04325
   03410 Base excision repair
    ABSL23_04325
   03420 Nucleotide excision repair
    ABSL23_04325
   03430 Mismatch repair
    ABSL23_04325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hanx03032]
    ABSL23_04325
   03400 DNA repair and recombination proteins [BR:hanx03400]
    ABSL23_04325
DNA replication proteins [BR:hanx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ABSL23_04325
DNA repair and recombination proteins [BR:hanx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ABSL23_04325
   MMR (mismatch excision repair)
    Other MMR factors
     ABSL23_04325
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    ABSL23_04325
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: XCF17248
UniProt: A0AAU8CF68
LinkDB
Position
complement(545718..546461)
AA seq 247 aa
MFKAIVSADTLRETLDSVSVLVDECKIHLDEDGLSIRAVDPANVGMVDLDLGAAAFESYE
ADGGIIGVNLSRLEDIAGMADTDQLVQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLSANVVIEGADIDRSVRAADMVSDHIALGVDAADELFYVDAEGDTDDVHLELTR
DDLIDLEAGDAHSLFSLDYLKDMNKAIPKDAEVELELGDEYPVKIHFDIAEAQGHVTYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggcgattgtgagcgccgacacgctccgggaaacgcttgactccgtgagcgtg
ctggtggacgaatgcaagatccacctcgacgaagacggcctctccatccgcgctgtcgac
cccgcgaacgtcggcatggtcgacctcgacctcggggcggccgcgttcgagtcctacgaa
gccgacggcggcatcatcggcgtcaacctctcccggctcgaagacatcgccgggatggcc
gacaccgaccagctcgtccagctggaactcgacgaggagacccgcaagctccacatccag
atcgacgggctggagtacacgctcgcgctcatcgaccccgactccatccgacaggagccg
gacatcccggacctggacctctccgcgaacgtcgtcatcgagggcgcggacatcgaccgc
tcggtgcgcgccgcggacatggtctcggaccacatcgcgctcggcgtcgacgccgccgac
gaactgttctacgtcgacgcggagggcgacaccgacgacgtccacctcgaactcacccgc
gacgacctcatcgacctcgaagcgggcgacgcccacagcctgttcagcctcgactacctc
aaggacatgaacaaggccatcccgaaggacgcggaggtcgaactcgaactcggcgacgag
taccccgtcaagattcacttcgacatcgcggaggcgcagggccacgtcacctacatgctc
gcgccccggattcagagcgactag

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