KEGG   Halobacterium sp. NMX12-1: ABSL23_04420
Entry
ABSL23_04420      CDS       T10641                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
hanx  Halobacterium sp. NMX12-1
Pathway
hanx03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hanx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABSL23_04420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hanx03032]
    ABSL23_04420
DNA replication proteins [BR:hanx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     ABSL23_04420
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RuvB_N AAA_14 AAA_assoc_2 AAA_22 AAA_18 AAA_16 ResIII RCF1-5-like_lid DNAX_ATPase_lid TIP49 AAA_25 PhoH AAA_5 AAA_7 AAA_3 AAA_2 nSTAND3 RNA_helicase Viral_helicase1
Other DBs
NCBI-ProteinID: XCF17267
UniProt: A0AAU8CE97
LinkDB
Position
562945..563916
AA seq 323 aa
MADAAGGRQEIWVEKYRPQRLEDVVGHPSITERLQSYVDRDDLPHLLFAGPAGTGKTTAS
IAIAKEIYGDDWQDNFLELNASDERGIDVVRDRIKDFARTSFGGYDHRIIFLDEADALTD
DAQSALRRTMEQFSENTRFILSCNYSSKIIDPIQSRCAVFRFSPIDDDAVAAHLRDLAAR
EDLEYTEDGIDALVYAADGDMRRAINALQAASATGDVVDEETVFAITATARPEEIEDMVT
EAIDGDFTAARSTLDDLISNRGLAGGDIIDQVHRSVWEFDVEEAAAVRLLDRLGEADYRI
AEGANERVQLEALLASVALNADE
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcagacgccgccggcggtcggcaggaaatctgggtggagaagtaccgaccacagcgc
ctcgaagacgtcgtcgggcacccctcgatcaccgagcgcctccagagctacgtcgaccgc
gacgacctcccgcacctcctgttcgcggggcccgcgggcaccgggaagaccaccgccagc
atcgccatcgccaaggagatctacggcgacgactggcaggacaacttcctcgaactgaac
gccagcgacgagcgcggcatcgacgtggtccgggaccgcatcaaggacttcgcgcgcacg
tcgttcggcggctacgaccaccgcatcatcttcctcgacgaggcggacgcgctcaccgac
gacgcccagtcggcgctgcgccgcacgatggagcagttctccgagaacacccgcttcatc
ctctcctgtaactactcctcgaagatcatcgacccgattcagtcccggtgtgcggtgttc
cggttctcgcccatcgacgacgacgcggtcgccgcgcacctccgcgacctcgcggcccgc
gaggacctcgaatacacggaggacggcatcgacgcgctcgtgtacgccgcggacggcgac
atgcgccgcgccatcaacgccctgcaggcggcctcggcgacgggcgacgtggtggacgag
gagacggtgttcgccatcacggcgaccgcccgccccgaggaaatcgaggacatggtgacg
gaggccatcgacggcgacttcacggccgcgcgctcgacgctcgacgacctcatctcgaac
cgcgggctcgccggcggcgacatcatcgaccaagtgcatcgctccgtctgggagttcgac
gtcgaggaggcggccgcggtccggctgctggaccgcctcggcgaggccgactaccgcatc
gcggagggcgccaacgagcgcgtccaactggaggcgctgctcgcttcagtcgcgctgaac
gccgacgagtag

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