Halobacterium sp. NMX12-1: ABSL23_06165
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Entry
ABSL23_06165 CDS
T10641
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABSL23_06165 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanx03021
]
ABSL23_06165 (rpoB)
Enzymes [BR:
hanx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABSL23_06165 (rpoB)
Transcription machinery [BR:
hanx03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
ABSL23_06165 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_TOP3B
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
XCF17587
UniProt:
A0AAU8CF74
LinkDB
All DBs
Position
902111..903937
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AA seq
608 aa
AA seq
DB search
MSTEREAKVYVNGSLVGTHEDPEELAAQIREARRRGEVSEMVNVSVRDRTNEVIVNADAG
RARRPLLVVEDGEPLVTDEEMDAIENGDIDFEDLVHAGKVEFIDAEEEEDILVGVDQDEL
TEKHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDTRQH
LLHYPQKAMVNTQTTEQIGYDDRPAGQNFVVAVMSYEGFNIEDALVMNQGSVDRALSRSH
FFRTYEGEERRYPGGQEDRFEIPSDDVRGGRGEDAYTHLDDDGLVNPETQVDDSSVLLGK
TSPPRFLEEPEDMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLAKVSVRDERI
PELGDKFASRHGQKGVVGHLAPHEDMPFTQEGVVPDLVLNPHALPSRMTVGHVLEMLGGK
AGSLDGRSVDGTAFTGENEEELRSTLEERGFKSSGKEVLYSGVSGEKIEAEIFVGTIFYH
KLYHMVSNKLHARSKGPVQVLTRQPTEGRAREGGLRVGEMERDTVIGHGAAMVLKERLLD
SSDREEIHVCGNCGMTAVENYEQRRVYCPNCEEETDVHSLEMSYAFKLLLDEMKALGIAP
RLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggaacgagaagcgaaagtctacgtcaacggcagtctcgtcgggacccacgag
gaccccgaggagctggcagcacagatccgagaggcgcgccgacggggagaggtctccgag
atggtgaacgtctccgtgagagaccgcacgaacgaagtcatcgtcaacgcggacgcgggc
cgggcgcggcgcccgctgctcgtcgtcgaggacggcgagccgctggtcaccgacgaggag
atggacgccatcgagaacggcgacatcgacttcgaggacctagttcacgcggggaaagtc
gagttcatcgacgccgaggaagaggaagacatcctcgtcggcgtcgaccaggacgagctc
accgagaagcacacccacctcgagatcgacccgcagctcatcttcggcatcggcgccggg
atgattccctatcccgagcacaacgccagtccccgcattacgatgggcgcggggatgatg
aagcagagtctgggcctgccggcggcgaactaccgcatccggccggacacccgccagcac
ctcctgcactacccgcagaaggcgatggtgaacacccagaccaccgaacagatcggctac
gacgaccggccggccgggcagaacttcgtcgtcgccgtcatgtcctacgagggcttcaac
atcgaggacgccctcgtcatgaatcagggctccgtggaccgcgcgctctcgcgctcgcac
ttcttccgcacgtacgagggcgaggaacggcgctaccccggcggtcaggaggaccgcttc
gagattccgagcgacgacgtgcgtggcggccgcggtgaggacgcgtacacgcatctcgac
gacgacggcctcgtcaaccccgagacgcaggtcgacgactcctctgtcctgctcgggaag
acgagcccgccgcggttcctcgaagaacccgaggacatgggcgggctcagcccgcagaag
cgccgcgagacgagcgtcacgatgcgctccggcgaggacggcgtcgtggacacggtcacc
ctcatggaaggcgaggacggctcgaagctcgcgaaagtctccgtgcgtgacgaacgcatc
cccgaactcggggacaagttcgcgtcccgccacggtcagaagggcgtcgttggccacctc
gcgccccacgaggacatgccgttcacgcaggagggcgtcgtgcccgacctcgtgctgaac
ccgcacgcgctgccgtcccggatgacggtcggccacgtgctggagatgctcggcgggaaa
gccggcagcctcgacgggcgctccgtcgacggcacggcgttcaccggcgagaacgaggag
gaactgcgctcgacgctggaggaacgcggcttcaagtcctccggcaaggaagtgctgtac
tccggcgtttccggggagaaaatcgaggccgagatcttcgtcggcacgattttctaccac
aagctctaccacatggtgtcgaacaagctccacgcccgctcgaaggggccggtccaggtc
ctcacgcggcagccgacagaggggcgcgcccgcgagggcggcctccgcgtcggggagatg
gagcgcgacaccgtcatcggccacggcgccgcgatggtgctcaaagagcgcctgcttgac
tcctcggaccgcgaggagattcacgtctgcggcaactgtggcatgaccgccgtggagaac
tacgagcagcgccgcgtctactgtccgaactgcgaggaggagacggacgtgcacagcctc
gagatgagttacgcgttcaagctcctgctcgacgagatgaaagcgctcggcatcgcgccg
cgactcgaactggaggacgcagtatga
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