Halobacterium sp. NMX12-1: ABSL23_06775
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Entry
ABSL23_06775 CDS
T10641
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABSL23_06775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_06775
Enzymes [BR:
hanx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ABSL23_06775
DNA repair and recombination proteins [BR:
hanx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABSL23_06775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XCF17699
UniProt:
A0AAU8CG10
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All DBs
Position
1016024..1016854
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AA seq
276 aa
AA seq
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MRVGAHVSIAGGVDNAVENELDVGGNCGQIFTHSPQVWQDPNVGDDEAAAFREGTDEHLD
SPWVIHSSYLVNLCTPKDDLREKSVDSMQKEVDAAAKLDIEYVNVHLGAHTGAGVQQGLD
NAVSALDELDIPDGVTVLVESDAGSGTKLGGDFEHLAYVLEESAHDLGVCVDTAHAFAAG
YDLSTPEAVAETLAEFDDVVGFEHLHCVHLNDSKHDCGTNKDEHAHIGEGLIGEEGMDAF
VNHDAITDVPLVLETPHEDGRGFAWNIEKVRELRNN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtaggcgcacacgtctctatcgcgggcggcgtcgacaacgccgtcgagaacgaa
ctggacgtcggcgggaactgcgggcaaatcttcacgcactcgccgcaggtctggcaggac
ccgaacgtcggcgacgacgaagccgccgcgttccgggagggcactgacgaacacctcgac
agcccgtgggtcatccactcgtcgtacctcgtgaacctctgcacgcccaaggacgacctc
cgcgagaagtccgtggacagcatgcagaaggaggtcgacgccgccgccaagctcgacatc
gagtacgtcaacgtccacctcggcgcgcacactggcgcgggcgtccagcagggcctggac
aacgccgtcagcgcgctcgacgaactcgatattcccgacggggtcaccgtgctcgtggag
agcgacgcgggctcgggcacgaagctcggcggcgacttcgagcacctcgcgtacgtgctg
gaggagtccgcccatgacctcggcgtctgcgtcgacaccgcgcacgcgttcgccgcaggc
tacgacctctcgacgcccgaggcggtcgcggagacgctcgcggagttcgacgacgtcgtc
ggcttcgagcacctccactgcgtccacctcaacgactcgaaacacgactgcggcacgaac
aaggacgaacacgcccacatcggcgaaggcctcatcggcgaggaagggatggacgcattc
gtcaaccacgacgccatcaccgacgtgccgctcgtgctggagacgccccacgaggacggc
cgcgggttcgcgtggaacatcgagaaggtcagagagctgcggaacaactga
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