Halobacterium sp. NMX12-1: ABSL23_07255
Help
Entry
ABSL23_07255 CDS
T10641
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABSL23_07255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanx03021
]
ABSL23_07255
Transcription machinery [BR:
hanx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABSL23_07255
Prokaryotic type
Archaeal type
TFB
ABSL23_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
Sigma70_r4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
XCF17791
UniProt:
A0AAU8CFX9
LinkDB
All DBs
Position
complement(1096426..1097379)
Genome browser
AA seq
317 aa
AA seq
DB search
MTDARMRSREQERTDEEETTDGCPECGGLVVQDEEHGESVCADCGLVVEEDGIDRGPEWR
AFDSKEKDEKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLSSNQRQKMQRLRKWNERF
RTRDAKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALEDDLLPGRSIEGVATSCV
YAAARQAGVPRSLDEIADVSRVEKSEIARTYRYVVRELGLEVAPADPESYVPRFASSLEL
SDESAHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSEVADISEVT
IRNRYHELLEAEDTIPV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgcacgcatgcgctcccgagagcaggagcgcacggacgaagaagagacgacc
gacggctgcccggagtgtggcggtctcgtcgtccaggacgaagagcacggcgagtcggtc
tgcgccgactgcggcctcgtggtcgaggaggacggcatcgaccgcgggcccgagtggcgc
gcgttcgactccaaagagaaagacgagaaatcccgcgtcggcgcccccaccacgaacacg
atgcacgacaaagggctctcgacgaacatcgactggcgcgacaaggacgcctacggcaac
tccctgtccagcaatcagcgccagaagatgcagcgcctgcgcaagtggaacgagcgcttc
cgcacgcgcgacgccaaagagcgcaacctcaagcaggcgctcggcgaaatcgaccggatg
gcctccgcgctcggcctcccggacaacgtccgcgagaccgcgtcggtcatctaccgccgc
gcgctcgaagacgacctgcttccgggtcggtctatcgagggcgtcgcgacctcctgcgtg
tacgccgccgcccgacaggccggcgtcccgcgcagcctcgacgaaatcgcggacgtctcc
cgcgtcgagaagtccgagatcgcgcgcacgtaccgctacgtcgtccgcgaactcggtctg
gaagtcgcgcccgccgaccccgagagctacgtcccgcggttcgcgtcctcgctggaactc
tcggacgagtccgcccaccgcgcccgcgaactcctcaagaccgcgaaggacaagggcgtc
cactccggcaagagccccgtgggactggcggccgccgcggtgtacgccgccgccctcctc
acgaacgagaagacgacgcaggcgaaggtctcggaggtcgccgacatctccgaggtcacg
attcgcaaccgctaccacgagctgctcgaagccgaagacacgattccggtctga
DBGET
integrated database retrieval system
