Halobacterium sp. NMX12-1: ABSL23_07885
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Entry
ABSL23_07885 CDS
T10641
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx00300
Lysine biosynthesis
hanx00470
D-Amino acid metabolism
hanx01100
Metabolic pathways
hanx01110
Biosynthesis of secondary metabolites
hanx01120
Microbial metabolism in diverse environments
hanx01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABSL23_07885 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABSL23_07885 (dapF)
Enzymes [BR:
hanx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABSL23_07885 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XCF17915
UniProt:
A0AAU8CHZ3
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Position
complement(1222633..1223451)
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AA seq
272 aa
AA seq
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MIPYERYHGTGNDFAIVDASNYVPDRGAFAERLCSDLGIDGVLFLALEDRYTPPRAVMTL
RQPDGSTADMCGNGARCAARWVAEQTGADAVMLDTQAGTRRADLDGAEVTVEMGEPSFAP
RDVPAFRDEPMEREELAGYEVTAVNTGVPHAVAFVDDVDDVDIEADAPEIRHHEAFPEGA
NVTFASPDGEDAFRQRTFERGVEGETDSCGTGAVAVAAVARREGRCGDRVAVRPPGGELR
VDLSGTTATLRGPTEHELDGEAEVVSARQLDA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgattccctacgaacgataccacggcaccggcaacgacttcgcaatcgtcgacgcgtcg
aactacgtccccgaccgcggggcgttcgccgagcggctctgctccgacctcggcatcgac
ggcgtcctcttcctcgcgctggaggaccgctacacgccgccgcgcgcggtgatgacgctg
cgccagcccgacggctccaccgccgacatgtgcgggaacggcgcgcgctgtgcggcccgc
tgggtcgccgagcagaccggcgcggacgccgtgatgctggacacgcaggcggggacgcgg
cgcgcggacctcgacggcgccgaagtgaccgtggagatgggcgagccgtcgttcgcgccc
cgcgacgtgccggcgttccgcgacgagccgatggagcgcgaggaactggcgggctacgag
gtcaccgccgtgaacacgggcgtcccccacgcggtcgcgttcgtggacgacgtcgacgac
gtggacatcgaggcggacgcgcccgagattcgccaccacgaggcgttccccgagggcgcg
aacgtcacgttcgcgtccccggacggcgaggacgcgttccgccagcgcacgttcgagcgc
ggcgtcgagggcgagaccgactcctgcgggacgggcgcagtcgcggtcgccgccgtcgcg
cgccgcgagggtcgctgcggggaccgagtcgcggtgcggccgccgggcggcgaactccgc
gtcgacctctcgggcaccaccgcgacgctgcgcggcccgaccgagcacgaactcgacggg
gaagccgaggtcgtctccgcgcgccagctcgatgcctga
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