Halobacterium sp. NMX12-1: ABSL23_10570
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Entry
ABSL23_10570 CDS
T10641
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABSL23_10570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hanx03021
]
ABSL23_10570
Transcription machinery [BR:
hanx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABSL23_10570
Prokaryotic type
Archaeal type
TFB
ABSL23_10570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_N
TFIIB_C_1
Motif
Other DBs
NCBI-ProteinID:
XCF15684
UniProt:
A0AAU8CBR0
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All DBs
Position
1704389..1705258
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AA seq
289 aa
AA seq
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MTTDETSAEPQVVGDALDRIQSAATVLGVPAETTETAVAVFRRHRDQRAAHAHNVATTAA
ACLYVACKVERVPRTVDEFVDATEADRTQLLRRAKAVTSELGIDLSGFADASQYVDRYAD
ELALPEGVADRAREIVDHCEDAGIAGGKSPSGWAAAAIYNACVEADMDVRQDTLTELADV
THVTIRNRYKEQREVLRERNPPPATAAAAIDWYREYLPASEYVADTARELLATAADYHPV
DDEAAAWAAASLRVAGERAGAPIGMKALKTPAGCSSSDIHERASDLESL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacgagacgagcgccgagccgcaggtggtcggcgacgcgctcgaccgaatc
cagtccgccgcgaccgtcctcggcgtccccgcggagacgaccgagaccgcggtcgcggtg
ttccgacggcaccgcgaccagcgcgccgcccacgcccacaacgtcgcgacgaccgccgcg
gcgtgcctctacgtcgcgtgcaaggtcgagcgcgtcccgcgcaccgtcgacgagttcgtg
gacgcgaccgaagccgatcgcacgcagctcctgcggcgcgcgaaggccgtgaccagcgaa
ctcggcatcgacctctcggggttcgcggacgcctcccagtacgtcgaccggtacgccgac
gaactcgcgctccccgagggcgtcgcggaccgcgcccgcgaaatcgtcgaccactgcgag
gacgccggcatcgcgggcgggaagtccccgagcgggtgggcggcggccgccatctacaac
gcctgcgtcgaggccgacatggacgtccgacaggacacgctcacggagctggcggacgtc
acgcacgtcaccatccggaaccgctacaaggaacagcgcgaggtgctgcgcgagcggaac
ccgccgcccgcgaccgcggcggccgccatcgactggtaccgcgagtacctgcccgcctcg
gagtacgtcgctgacaccgcccgggagttgctcgcgacggcggccgactaccacccggtg
gacgacgaggcggccgcgtgggccgccgcctcgctgcgcgtcgccggggagcgcgcgggc
gcccccatcggcatgaaggcgctgaagacgcccgccggctgttcttcctcggacatccac
gagcgcgccagcgacctcgaatcgctgtag
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