Halobacterium sp. NMX12-1: ABSL23_10885
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Entry
ABSL23_10885 CDS
T10641
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K04479
DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:
2.7.7.7
]
Organism
hanx Halobacterium sp. NMX12-1
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_10885 (dinB)
Enzymes [BR:
hanx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABSL23_10885 (dinB)
DNA repair and recombination proteins [BR:
hanx03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
ABSL23_10885 (dinB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
HHH_5
Cdd1
DNA_pol_lambd_f
CATASP
DUF4332
HHH_RS2-RL21-YNQ2
Motif
Other DBs
NCBI-ProteinID:
XCF15743
LinkDB
All DBs
Position
1762704..1763945
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AA seq
413 aa
AA seq
DB search
MVDGERLPGAPDREERIVLHVDMDCFYASCERRREPALRGEPVVVGMGYEPGETVGAVAT
ASYEAREYGVESAQAIGAALDNLPRKADEPDNPDAGYYRPVDLDFYQDVGGSVKEILHEL
GDTVREVSIDEAYLDVTDRTAWGVAEGFARHVKQRIAREVGVPASVGVAPDMSTAKLASD
YDKPDGLVVVEPDEVREFLAPIDVADVHGIGPVRARELREMGIETAGDLASADPYELTDK
FGDRGRDLYRRARGEDNRPVEPRGEPKSLSRESAFDGATDDFQRVREQVATLAEAVADRA
TRKDAFYRTIGVKVVTPPYDVHTRAESLPGPVDDPGLVDDVTQDLLGEFDGESVRKVGVR
VSNLDFSEREQASLDGFDSDGAGDAAASTSLRGRRRDEPDGGRDGQISLDEFE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacggcgagcgactccccggcgcgcccgaccgcgaggagcgcatcgtcttgcac
gtcgacatggactgcttttatgccagctgcgagcgccgccgcgaacccgcgttgcgcggc
gaacccgtcgtcgtcggcatgggctacgagcccggggagaccgtcggcgcggtcgcgacc
gcgagctacgaggcccgcgagtacggcgtcgagagcgcgcaagccatcggcgccgccctc
gacaacctcccgcggaaggccgacgagcccgacaacccggacgcgggctactaccggccc
gtggacctcgacttctatcaggacgtgggcggctcggtcaaggagattctgcacgagctc
ggggacacggtgcgggaggtgagcatcgacgaggcctacttggacgtcaccgaccggacc
gcgtggggcgtcgccgaggggttcgcgcgccacgtcaaacagcgcatcgcccgcgaagtg
ggggtgccggcgagcgtcggcgtcgcgcccgacatgagcaccgcgaagctcgccagcgac
tacgacaagcccgacggcctcgtcgtcgtcgaacccgacgaagtgcgggagttcctcgcg
cccatcgacgtcgcggacgtccacggcatcggcccggttcgcgcgcgggaactccgcgag
atgggcatcgagaccgcgggcgacctcgcgagcgcggacccctacgaactcaccgacaag
ttcggcgaccgcggccgcgacctctaccggcgcgcccgcggcgaggacaaccgccccgtt
gagccccgcggggagcccaagagcctctcccgggagtccgccttcgacggcgcgaccgac
gacttccagcgcgtgcgcgagcaggtcgcgacgctcgccgaagccgtcgcggaccgcgcc
acccggaaggacgccttctaccgcactatcggagtcaaggtcgtgacgccgccgtacgac
gtccacacgcgcgccgagtccctcccgggacccgtcgacgaccccgggctcgtggacgac
gtcacgcaggacctcctcggggagttcgacggcgagtccgtgcggaaggtcggcgtgcgc
gtctcgaatctggacttctccgagcgcgagcaggcgagcctcgacggcttcgacagcgac
ggcgccggcgacgcggcggcctcgacgtccctgcgggggcgccggcgcgacgaacccgac
ggcggccgcgacggccagatttcgctggacgagttcgagtga
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