Halobacterium sp. NMX12-1: ABSL23_12470
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Entry
ABSL23_12470 CDS
T10641
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03022
Basal transcription factors
hanx03420
Nucleotide excision repair
Brite
Enzymes [BR:
hanx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ABSL23_12470
Transcription machinery [BR:
hanx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ABSL23_12470
Chromosome and associated proteins [BR:
hanx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ABSL23_12470
DNA repair and recombination proteins [BR:
hanx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ABSL23_12470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCF16044
UniProt:
A0AAU8CAB8
LinkDB
All DBs
Position
complement(2038057..2040453)
Genome browser
AA seq
798 aa
AA seq
DB search
MGDDDWRDFFGFDEPYDQQADAIDAAIDAGERGGYLAMEGPCGTGKTMAALTAAAQLVRG
TDDYERVFVVTPVKQQLQQFVADLRQMNSGLEEPLNGVALVGKRDLCPYGREDVFPPDAS
VHDRCEDLRENTAGLVEADEGGGSFDGQDARELTELRAADALDEPWWDPAKARDLARSAR
ADADHNLSENPLRTDGADSPYVPVQPSAPDEFADGDPPLFCPFEADWYGRNKGSPVGFDV
GDYNVATSEDFLPAAVEYGTCPHRVQQVMLDHADVVIGNYNHLFDPSTRGLTEHLLDERT
FVVVDEAHRLEERVRDLLSDRVGRHTLARARNDLRQLLTTAKQSESNRQQVRDELKSYEV
SIDAVREAVEFLDDVSEWLDDRVAEYLANEGHDPNRPRDLPEYDHEIPLRDPETDEPDDL
TRWAEQHGYTGGLWRSLADIGTAVAAILEDDGDRSAVCGAVGVTLQRWWERDHATYFREI
ELEHAPKESGRAGAAWAEAYTPALVTYNCMPARALRETFAGLGGGVLMSATLEPLDVFRE
VTGLDRLEAGAGDAEARPVVERRYDLRFPEENRASFTVDATPFTARNRGDPTSENDNQTR
EQYRYVLRTVARSPGNVLVCMPNYREAAWAGDYLEDAVEKPVLVDESSSNEDTDALKRQF
FRGDGKVMVTSTRGTLTEGVDYDGDKLAACAVVGVPLVNVGSPRVRAVRRAYADAFGEDH
AFEYALTVPAVRRARQAIGRVIRGPEEVGVRGFVGQRYVEGARHSVFEYLGPGEREEFTR
MTPEFLGDQLDLFWSEHA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgacgactggcgcgacttcttcgggttcgacgagccctacgaccagcaggcc
gacgccatcgacgcggccatcgacgccggcgagcgcggcggctacctcgcgatggagggg
ccctgcggcaccgggaagacgatggccgcgctgaccgcggccgcccagctcgtgcgcggc
accgacgactacgagcgcgtgttcgtcgtcacccccgtgaaacagcagctccagcagttc
gtcgccgacctccggcagatgaattcggggctggaggaaccgctgaacggcgtcgcgctc
gtcgggaagcgcgacctctgcccgtacggccgcgaagacgtgttcccgccggacgccagc
gtccacgaccgctgcgaggacctccgggagaacacggcgggcctcgtggaggccgacgag
ggtggcgggagcttcgacgggcaggacgcccgggaactgacggaactgcgcgctgcggac
gcgctcgacgagccgtggtgggaccccgcgaaggcccgcgacctcgcgcgctcggcccgc
gcggacgccgaccacaacctctccgagaaccccctgcggacggacggcgcggactcgccg
tacgtcccggtccagccgagcgcgcccgacgagttcgccgacggcgacccgccgctgttc
tgcccgttcgaggccgactggtacggccggaacaaggggtcgccggtcggcttcgacgtc
ggcgactacaacgtcgccaccagcgaggacttcctgccggcggccgtcgagtacggcacc
tgcccgcaccgcgtccagcaggtcatgctcgaccacgcggacgtcgtcatcgggaactac
aaccacctcttcgacccgagcacgcgcgggctcaccgaacacctcctcgacgagcgcacg
ttcgtcgtggtggacgaagcccaccgcctggaggagcgcgtgcgcgacctgctctccgat
agggtgggccggcacacgctcgctcgcgcccgcaacgacctccggcagctgctcacgacg
gccaagcagagcgagtcgaaccgccagcaggtccgggacgaactgaagagctacgaggtc
tccatcgacgccgtccgggaggccgtggagttcctcgacgacgtctcggagtggctcgac
gaccgggtggccgagtacctcgccaacgagggccacgacccgaaccggccccgcgacctc
cccgagtacgaccacgagattccgctccgggaccccgagaccgacgagcccgacgacctc
acgcggtgggccgaacagcacggctacacgggcgggctgtggcggtcgctggcggacatc
ggcaccgcggtcgcggcgattctggaggacgacggcgaccgctcggcggtctgcggcgcg
gtcggcgtcaccctccagcggtggtgggagcgcgaccacgcgacgtacttccgggaaatc
gaactggagcacgcgcccaaagagtcggggcgcgccggcgcggcgtgggcggaggcgtac
acgcccgcgctcgtgacgtacaactgcatgccggcacgcgccctccgcgagacgttcgcg
ggactgggcggcggcgtgctgatgagtgcgacgctggagccgctggacgtcttccgcgag
gtgacgggactggaccgactcgaagccggcgcgggcgacgcggaagcccggccggtcgtg
gagcgccgttacgatctccgattccccgaggagaaccgcgcgagcttcaccgtggacgcg
acgccgttcaccgcgcgcaaccgcggcgaccccaccagcgagaacgacaaccagacccgc
gagcagtaccgctacgtcctccgcaccgtcgcgcgctcgccggggaacgtcctcgtctgc
atgccgaactaccgggaagcggcgtgggctggcgactacctcgaagacgccgtcgagaag
cccgtgctcgtcgacgagtcctccagcaacgaggacacggacgcgctcaagcgccagttc
ttccgcggtgacggcaaagtgatggtgaccagcacccgcggcacgctcacggagggcgtg
gactacgacggcgacaaactcgcggcgtgcgccgtcgtcggcgtcccgctggtgaacgtc
gggtcgcccagagtccgcgcggtccgccgggcgtacgcggacgcgttcggcgaggaccac
gccttcgagtacgcgctgacggtgccggcggtgcggcgcgcgcggcaggccatcgggcgc
gtgattcgcggcccagaagaggtcggcgtgcgcgggttcgtcggccagcggtacgtcgag
ggcgcgcgccactccgtcttcgagtacctcgggcccggcgagcgcgaggagttcacgcgc
atgaccccggagttcctcggcgaccagttagacctgttctggagcgagcacgcctga
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