Halobacterium sp. NMX12-1: ABSL23_12960
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Entry
ABSL23_12960 CDS
T10641
Name
(GenBank) DEAD/DEAH box helicase
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABSL23_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hanx03032
]
ABSL23_12960
Enzymes [BR:
hanx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ABSL23_12960
DNA replication proteins [BR:
hanx03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
ABSL23_12960
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
ABSL23_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Dna2
PDDEXK_1
Viral_helicase1
ResIII
AAA_16
UvrD-helicase
SLFN-g3_helicase
AAA_22
UvrD_C_2
Cas_Cas4
Helicase_RecD
DEAD
nSTAND3
PIF1
PhoH
NPHP3_N
AAA
AAA_25
SRP54
bpMoxR
AAA_7
PDZ
RuvB_N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XCF16140
UniProt:
A0AAU8CB95
LinkDB
All DBs
Position
2121501..2124215
Genome browser
AA seq
904 aa
AA seq
DB search
MNVRGEVTDVDEVRSVNTQYGDRDVLDVHVRPDADSDAAADDHGAAVRVTLWGKWTEAVQ
YLESGMELLVTEAEEDEWNGEVQYSTSKQSYVVVEPDFLVDVTNIRSFVQCPRLYYLNKL
SGLPLKYPVTKGTIVHEVFGDLLRGRDLDESVAERVADAGLELGLLGRDREEVEADVRAN
ASAIEGWLKQGHLSGDGGTTEDTAEGWRAGDDWRSEYTLISETFGIKGRCDAIRRGMPVE
LKTGKNTNRDPRFHDKVQAACYALMLEDRGVNADTGTLLYTKNAAVDRSEESGDLSPAKE
FSIGKGFLDFVVRQRNHLAAIEYEGSPPTGFEADAKCEYCFEQDTCMVVSGRLDQESKAG
QLGEPLPDEERAYFDDIYAAIERERDAVHDEYRKLWEQTADERADDDRAVVDLEPAGQEE
LPDGRWRMTAKRPTAAASKIRQGDRVLASDGDPVRGTAEMARVETLAPDRVVVTADEPVE
LRRLDVYPSELSVDRMLTALHDALLKGDQRRKDVLFDRASPEFRDDEHTVIENNDAQNDA
VSRALNAEDFALVHGPPGTGKTYTIATLIREFVDRGDRVLLSAFTNRAVDNALEALREQG
HEDIVRVGTSTGVREDMQDLRLNQSGDPAECARALQTADVVAATTATCGSRVMREQEFDV
VLVDEASQLTEPDTLAAVNRGERFVLVGDHEQLPPVVRSGGRLSESLFERLHDTHPEASV
MLDQQYRMSQRIQAFSSEEFYDGQLRPATGEVAAQTLADLGVETGGAVQNGVTFHDVPGT
SDAHVDPAEAERVGEVVREYVEAGVNPEDVGVIAPFRAQVAEIGRRVPEGVAVDTVDRFQ
GSSKEVIVVSFVATGSLDGPIFEDHRRVNVALTRAKKSLVLVGDEAALRSEPLYDRMVEW
ASLS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtacggggcgaggtgaccgacgtcgacgaggtgcggtccgtgaacacgcagtac
ggcgaccgggacgtgctcgacgtccacgtccggccggacgcggacagcgacgcggccgcc
gacgaccacggggcggccgtgcgcgtgacgctgtgggggaagtggacggaggccgtccag
tacctcgaatccgggatggagttgctggtgaccgaagccgaagaggacgagtggaacggc
gaggtccagtattcgacgagcaagcagtcgtacgtcgtcgtcgagccggacttcctcgtg
gacgtgacgaacatccggtcgttcgtgcagtgcccgcgcctctactacctgaacaagctc
tccgggctccccctcaagtacccggtgacgaaggggacaatcgtccacgaggtgttcggc
gacctgctccgcggccgcgatttggacgagtccgtcgcggagcgcgtggccgacgccggc
ctcgaactcggcctgctcggccgggaccgcgaggaagtcgaggccgacgtgcgcgcgaac
gcgtcagccatcgaggggtggctgaagcagggccacctctccggggacggcggcaccacc
gaggacacagcggagggctggcgcgcgggcgacgactggcgctcggagtacaccctgatt
tcggagacgttcggcatcaagggccgctgcgacgccatccgccgggggatgcccgtcgaa
ctgaagacggggaagaacacgaaccgcgacccgcgcttccacgacaaggtgcaggcggcg
tgttacgcgctgatgctcgaagaccgcggagtgaacgccgacacgggcaccctcctctac
acgaagaacgccgcagtggaccgcagtgaggagtccggcgacctctcgccagccaaggag
ttctccatcgggaagggtttcctcgacttcgtggtgcgccagcgcaaccacctcgcggca
atcgagtacgaggggagtccgcccacgggcttcgaggcggacgcgaagtgtgagtactgc
ttcgagcaggacacctgcatggtcgtgtcgggtcgcctcgaccaggaatcgaaggccggg
caactcggcgagccgctccccgacgaggagcgcgcgtacttcgacgacatctacgccgca
atcgagcgcgagcgcgacgccgtccacgacgagtaccgcaagctctgggagcagaccgcc
gacgagcgcgccgacgacgaccgcgcggtcgtggacctcgaacccgcgggccaagaggaa
ctgccggacggccggtggcggatgacggcgaagcgcccgaccgccgcggcctccaagatt
cgacagggcgaccgcgtgctcgcctccgacggcgaccccgtgcgaggaaccgcggagatg
gcgcgcgtggagacgctggcgcccgaccgcgtcgtcgtcaccgccgacgagcccgtcgaa
ctccgccgactggacgtctacccctccgagttgagcgtcgaccggatgctcaccgcgctc
cacgacgcgctcctgaagggcgaccagcgccgcaaggacgtgctcttcgaccgcgcgagc
cccgagttccgggacgacgagcacaccgtcatcgagaacaacgacgcgcagaacgacgcc
gtcagcagggcgctgaacgccgaggacttcgcgctcgtccacggcccgcccggcaccggg
aagacgtacaccatcgcgaccctcatccgggagttcgtcgaccgcggcgaccgcgtgctg
ttgtcggcgttcacgaaccgcgccgtcgacaacgcgctcgaagctctacgagaacagggc
cacgaggacatcgtccgcgtcgggacgtccacgggcgtccgcgaggacatgcaggacctc
cgcttgaaccagtccggcgacccggcggagtgcgcgcgagcgctccagaccgccgacgtc
gtcgcggcgacgaccgcgacctgcggttctcgcgtgatgcgcgagcaggagttcgacgtg
gtgctggtcgacgaggcgagccagctcaccgagccggacacgctcgcggcggtcaaccgc
ggcgagcgcttcgtgctcgtcggcgaccacgagcagctcccgccggtcgtgcgctcgggc
ggccggctctccgagtccctgttcgagcgcctccacgacacccacccggaggcgtcggtg
atgctcgaccagcagtaccggatgagccagcgcattcaggcgttctcctccgaggagttc
tacgacggccagctccgccccgcgaccggcgaggtcgccgcgcagacgctcgcggacctc
ggcgtggagacgggtggcgcggtccagaatggtgtcaccttccacgacgtgcccgggacg
agcgacgcgcacgtcgaccccgcggaggccgagcgcgtcggggaggtcgtccgcgagtac
gtggaggccggcgtgaatcccgaggacgtcggcgtcatcgcgccgttccgcgcgcaggtc
gccgaaatcgggcgccgggtccccgagggcgtcgccgtggacaccgtggaccgcttccag
ggctcttccaaggaggtcatcgtcgtctcgttcgtcgcgaccgggagcctcgacggcccc
atcttcgaggaccaccggcgcgtgaacgtcgcgctcactcgcgcgaagaagagtctcgtg
ctcgtcggcgacgaggcggcgctgcgctcggagccgctgtacgaccggatggtcgagtgg
gcgtcgctctcctga
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