Halobacterium sp. NMX12-1: ABSL23_13570
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Entry
ABSL23_13570 CDS
T10641
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03022
Basal transcription factors
hanx03420
Nucleotide excision repair
Brite
Enzymes [BR:
hanx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABSL23_13570
Transcription machinery [BR:
hanx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ABSL23_13570
DNA repair and recombination proteins [BR:
hanx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ABSL23_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCF16259
UniProt:
A0AAU8CDY5
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Position
2237168..2238967
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AA seq
599 aa
AA seq
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MTDISKEAFHDALEAVGRPVATAAQVARELDCTQAAAAEALAELAESGDVERADVENDPV
VWYPRDWLELTDRERVVPFPDRREIVVDQPAQFTRAQLSRFAHLADTTRSGSYRYVVREE
DVWAAPFESLDDLLDAMDRVLPRDCPGLKDWVEEQWTRATRFRLVTHEDGYVVLEAKTES
LLGNVADQHLADDVIRAPISDTEAWVAENKVAELKRTLYEAGYPVQDERDLESGEPLDVD
LDLDLRDYQQDWVERFVDASSGVLVGPPGSGKTVAAMGVLEAVGGETLILVPSRELAAQW
REELLAHTSLERDQIGEYHGGTKNVRPVTIATYQTAGMDRHRHVFDDREWGLVVYDEVHH
IPAEVARRSADLQSKHRLGLTATPVREDDKEEDIYTLVGPPIGTDWDALFDAGYVAEPTV
EIRYVPWRDDDARYEYAAESGHTRRRLAAENPAKDEEVKHLLRQHADKQALVFVDYLEQG
ERLAEAIDAPFVSGETRHAEREALFDRFRTGALDALVVSRIGDEGIDLPDAELAVVASGL
GGSRRQGAQRAGRTMRPGGQSLLFVLATRGTEEEDDARSRMRHLAAKGVRVTESGSEQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacatctccaaggaggcgttccacgacgcgctggaagccgtgggtcgcccggtc
gcgaccgccgcgcaggtcgctcgggaactggactgcacgcaggcggcggccgcggaggcg
ctggcggaactcgccgagtcgggcgacgtggagcgcgcggacgtggagaacgaccccgtg
gtgtggtacccgcgggactggctggaactcaccgaccgcgagcgcgtggtgccgttcccg
gaccgacgggaaatcgtcgtcgaccagcccgcgcagttcacgcgcgcgcagctgtcgcgg
ttcgcgcacctcgcggacacgacgcgctcggggagctaccggtacgtggtgcgcgaggag
gacgtgtgggcggcgccgttcgagagcctggacgacctcctcgacgcgatggaccgcgtg
ctcccgcgggactgccccggcctcaaggactgggtcgaagagcagtggacgcgcgcgacg
cggttccgcctcgtcacccacgaggacggctacgtcgtcctcgaagcgaagaccgagagc
ctgctcgggaacgtcgccgaccagcacctcgccgacgacgtgattcgcgcgcccatctcg
gacacggaggcgtgggtcgccgagaacaaggtcgccgaattgaagcgcacgctctacgag
gccggctaccccgtccaggacgagcgcgacctcgaatccggggagccgctggacgtcgac
ctcgacctcgacctccgggactaccagcaggactgggtcgagcggttcgtggacgcgagt
tcgggcgtgctcgtcgggccgccggggtcggggaagaccgtcgccgcgatgggcgtgctc
gaagccgtcggcggcgagacgctgattctggtgccgagccgcgaactcgcggcgcagtgg
cgcgaggaactgctcgcgcacacgagcctcgaacgcgaccaaatcggggagtaccacggc
ggcacgaagaacgtgcgcccggtcaccatcgcgacctaccagaccgcggggatggaccgc
caccgccacgtcttcgacgaccgcgagtgggggctggtcgtctacgacgaggtccaccac
atccccgcggaggtcgcgcgccggtcggcggacctccagagcaagcaccgcctcgggctc
acggcgacgcccgtccgcgaggacgacaaggaggaagacatctacacgctcgtcgggccg
cccatcggcacggactgggacgcgctgttcgacgcgggctacgtcgccgaaccgaccgtc
gagattcggtacgtgccgtggcgcgacgacgacgcccgctacgagtacgccgccgagagc
gggcacacgcgccgccggctcgccgccgagaaccccgcgaaagacgaggaagtgaagcac
ttgctccgccagcacgccgacaagcaggcgctcgtgttcgtggactacctcgaacagggc
gaacggctcgccgaagccatcgacgcgccgttcgtcagcggggagacgcggcacgccgaa
cgcgaggcgctgttcgaccgattccgcacgggcgcgctggacgcgctggtcgtctcccgc
atcggcgacgagggcatcgacctgccggacgccgagctcgccgtcgtcgcctcgggactt
ggcgggagccgccggcagggcgcccagcgcgccggccggacgatgcggccgggcggccag
tcgcttctgttcgtgctggcgacccgcggcaccgaggaggaggacgacgcccgcagccgg
atgcgccacctcgccgcgaagggcgtccgcgtcacggagtccgggagcgaacaggcctga
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