Halobacterium sp. NMX12-1: ABSL23_13965
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Entry
ABSL23_13965 CDS
T10641
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx04141
Protein processing in endoplasmic reticulum
Brite
Messenger RNA biogenesis [BR:
hanx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ABSL23_13965
Ribosome biogenesis [BR:
hanx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ABSL23_13965
Membrane trafficking [BR:
hanx04131
]
SNARE
SNARE associated proteins
Others
ABSL23_13965
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ABSL23_13965
Exosome [BR:
hanx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABSL23_13965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCF16333
UniProt:
A0AAU8CC73
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All DBs
Position
2296676..2298949
Genome browser
AA seq
757 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRAAMDELDLENGDYVVLSSDQGRAVARVWPGYPEDEGEG
IVRIDGRLRQEAEVGIDDNVAVEPADIKPATAVTVALPQNLRVRGDITPMVRDRLSGRPV
TTGQTIPISFGFGGMSTVSGQQIPVKIADTDPDGTVVVSNDTEIQVSEQPAEEIAAGAPA
GEAGDSTPNVAYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGK
TLIAKAVANEIDAHFQTISGPEIMSKYYGESEEKLREVFDEAEENAPAIVFIDEIDSIAP
KRGETQGDVERRVVAQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEIGV
PDKDGRKEILQVHTRGMPLAEEIDIDAFAESTHGFVGADIESLAKEAAMNALRRVRPDID
LEADEIDAELLESIQVTEDDFKAALKGIEPSALREVFVEVPDVTWDQVGGLEDTKERLRE
TIQWPLDYPEVFESMDLQSAKGVLLYGPPGTGKTLLAKAVANEANSNFISVKGPELLNKY
VGESEKGVREVFEKARANAPTVVFFDEIDSIAGERGSNMGDSGVGERVVSQLLTELDGIE
ELEDVVVVATTNRPDLIDSALLRPGRLDRHVHVPVPDEEARRAILDVHTRNKPLADDVDL
DYLASETANFVGADIEALVREATMNATREFINSVDPEEAIESVGNVRITAEHFDEALSDI
TPSVDEDVREQYEELEEKFEKAATPEEEERTTPGAFQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacggtcaagccgctcaagcagaaggacgcgggccgtggactggccgccatc
gaccgcgcggcgatggacgaactcgacctcgagaacggcgactacgtcgtcctcagcagc
gaccagggtcgcgccgtcgcccgcgtctggccgggctaccccgaggacgagggcgagggc
atcgtccgcatcgacggccgcctccgccaggaggccgaagttggcatcgacgacaacgtc
gccgtcgaacccgctgacatcaagcccgcgaccgccgtcacggtcgcgctcccgcagaac
ctccgcgttcgcggggacatcacgccgatggtccgggaccgcctgagcggccgccccgtc
accaccgggcagaccatccccatctccttcggtttcggcgggatgagcacggtctccggc
cagcagattcccgtcaaaatcgcggacacggaccccgacggcacggtcgtcgtgagcaac
gacaccgagattcaggtctccgagcagcccgccgaggaaatcgccgcgggcgcgcccgcc
ggcgaagccggcgacagcacgccgaacgtcgcctacgaggacatcggcggcctcgaccgc
gaactcgaacaggtccgggagatgatcgagctcccgatgcgccaccccgagctgttccag
cagctcggcatcgagccgccgaagggcgtgctcctccacggcccgcccggaacggggaag
acgctcatcgcgaaggccgtcgccaacgagatcgacgcgcacttccagacgatttcgggc
cccgagatcatgtcgaagtactacggggagagcgaggagaagctccgcgaggtcttcgac
gaggccgaggagaacgctcccgccatcgtcttcatcgacgagatcgactccatcgcgccc
aagcgcggcgagacgcagggtgacgtcgagcgccgcgtcgtcgcccagctcctctcgctg
atggacgggctcgaagagcgcggcgacgtcacggtcattgcggcgaccaaccgcgtggac
gccatcgaccccgcgctccgccgcggcggccgcttcgaccgcgaaatcgaaatcggcgtc
cccgacaaggacggccgcaaggagattctccaggtccacacgcgcggcatgcccctcgcc
gaggaaatcgacatcgacgcgttcgccgaatccacgcacgggttcgtcggcgccgacatc
gagagcctcgcgaaggaagccgcgatgaacgcgctccggcgcgtccgcccggacatcgac
ctcgaagccgacgagatcgacgccgaactcctcgaatccatccaggtcaccgaggacgac
ttcaaggccgcgctgaagggcatcgagccctcggcgctccgcgaagtgttcgtcgaagtc
ccggacgtcacctgggaccaggtcggcgggctcgaagacaccaaagagcggctccgcgag
accatccagtggccccttgactaccccgaggtcttcgagtccatggacctccagtccgcg
aagggcgtgttgctgtacggcccgccgggcacggggaagacgctgctcgcgaaggccgtc
gccaacgaggccaactcgaacttcatctccgtgaagggccccgaactgctgaacaagtac
gtcggggagtccgagaagggcgtccgcgaggtcttcgagaaggcgcgcgcgaacgccccc
acggtggtgttcttcgacgaaatcgactccatcgccggcgaacgcggctccaacatgggc
gactccggcgtcggcgaacgcgtcgtcagccagctcctcacggaactggacggcatcgag
gaactggaggacgtggtggtcgtcgcgacgacgaaccgccccgacctcatcgacagcgcc
ttgctccgtccgggccgcctggaccgccacgtccacgtccccgtccccgacgaggaagcg
cgccgcgccatcctcgacgtccacacgcgcaacaagccgctggccgacgacgtcgacctc
gactacctcgccagcgagaccgcgaacttcgtcggcgcggacatcgaagcgctcgtccgc
gaagccacgatgaacgccacccgcgagttcatcaactccgtcgaccccgaggaagccatc
gaatccgtcggcaacgtccgcatcaccgccgaacacttcgacgaagcgctctcggacatc
acgcccagcgtcgacgaagacgtccgcgagcagtacgaagaactcgaagagaaattcgag
aaggcagccacccccgaggaggaggaacgcaccacccccggggcgttccaatag
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