Halobacterium sp. NMX12-1: ABSL23_14830
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Entry
ABSL23_14830 CDS
T10641
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ABSL23_14830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hanx03019
]
ABSL23_14830
03009 Ribosome biogenesis [BR:
hanx03009
]
ABSL23_14830
04131 Membrane trafficking [BR:
hanx04131
]
ABSL23_14830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hanx04147
]
ABSL23_14830
Messenger RNA biogenesis [BR:
hanx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ABSL23_14830
Ribosome biogenesis [BR:
hanx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ABSL23_14830
Membrane trafficking [BR:
hanx04131
]
SNARE
SNARE associated proteins
Others
ABSL23_14830
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ABSL23_14830
Exosome [BR:
hanx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABSL23_14830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
AAA_33
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
Mg_chelatase
AAA_7
Sigma54_activat
AAA_18
NB-ARC
ABC_tran
ATPase
DUF815
AAA_3
AAA_17
nSTAND_NTPase5
TsaE
Parvo_NS1
AAA_lid_PRS2_C
AAA_30
AAA_24
AAA_11
PhoH
NACHT
SLFN-g3_helicase
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
XCF16499
LinkDB
All DBs
Position
2457228..2459453
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTIRIDGFTRQNADVGIGERVKIRKADAEKADRLVLAPPEDASVQFGSDAAGMVKRQIL
KRPVVSRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTDVELREEPISGFE
RTGGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEDSPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEV
GREEILKIHTRGMPLSDDVNLSSLADDTHGFVGADIESLTKEAAMRALRRYLPEIDLDEE
DIPPSLIDRMIVKRDDFKGALNEVEPSAMREVLVELPKLSWDDVGGLDEAKEDIKEAVEW
PLNQPEKFTRMGIDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPGRGQEVGNNVSERVVNQLLTELDGLEEMEEV
MVIAATNRPDIIDPALIRSGRFDRLVQVGQPDVEGREQILKIHTQDIPLAPDVSLRELAE
VTDGYVGSDLANITREAAIEALREDEDADEVEMRHFRRGMEDVRPTVTEDLMDYYDRVEE
QFKGSQNPETSREKGGHIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaacttgaggtggcgaaagcctacccgaacgactcgggcaggggtatc
gctcgcctcgaccccgacacgctcctgcacctgaagctcagcccgggagacatcatcgaa
atcgagggtgccgagacgaccgccgcgaaggtctggcgcgccgaccggcaggactggaac
accgacaccatccgcatcgacgggttcacgcgacagaacgccgacgtcggcatcggcgaa
cgcgtcaagattcgcaaggccgacgccgagaaggccgaccggctcgtgcttgcgccgccg
gaggacgcaagcgtccagttcggcagcgacgccgccggcatggtcaaacgccagattctc
aagcgcccggtcgtctcgcgggacatcgtgcccgtgatgagtagcacgaaccacccgttc
atgcgctcgcccgggcaggccatcccgctcatcgccgtcgagaccgagccggagggcgtc
tgtctcatcacggaggacacggacgtcgaactccgcgaggagcccatcagcggcttcgag
cgcaccggcgggggcatcacctacgaggacatcgggggcttagagaacgagattcagcgc
gtccgggagatggtggaactcccgatgaaacacccccagattttccagaagctcggcatc
gagccgccgcagggggtgttgctgcacggcccgccgggcaccgggaagacgctgctggcg
aaagccgtcgccaacgagacgtcggcgagcttcttctccatcgctggccccgagattatc
tccaagtactacggggagagcgaacagcaactcagagaaatcttcgaggacgccaaggag
gactcgccctccatcatcttcatcgacgagctggactccatcgcgcccaagcgcgaggac
gtcaccggcgaggtcgagcgccgcgtggtcgcccagctgttgacgatgatggacggcctc
gagggccgcgggcaggtcatcgtcatcgcggcgaccaaccgcgtcgacgccgtcgacccc
gcgctccgccgccccggccgcttcgaccgcgagatcgagatcggcgtgccggacgaggtc
ggccgcgaggagattctgaagattcacacgcgcggcatgccgctcagcgacgacgtgaac
ctctcgtcgctcgcggacgacacccacggcttcgtcggcgcggacatcgagagcctcacc
aaggaggccgcgatgcgcgcgctccggcgctacctccccgagatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccgcatgatcgtcaagcgcgacgacttcaagggcgcg
ctcaacgaggtcgaaccctccgcgatgcgggaagtcctcgtcgaactccccaagctctcg
tgggacgacgtcggcggcctcgacgaggccaaagaggacatcaaggaagccgtcgagtgg
ccgctcaatcagcccgagaagttcacccgcatgggcatcgacccgcccgccggcgtgctg
ctgtacggcccgcccggaacggggaagacgctgatggcgaaggccgtcgccaacgagacc
aacgcgaacttcatcagcgtccgcggcccccagctgctctcgaagtgggtcggcgagtcc
gagaaggccatccggcagacgttccggaaggcccgccaggtctccccgacggtcatcttc
ttcgacgaactcgacagcctcgcacccggccgcgggcaggaagtcggaaacaacgtctcc
gagcgcgtcgtcaaccaactgctgacggagttggacggcctcgaagagatggaggaagtg
atggtcatcgccgcgaccaaccgccccgacatcatcgaccccgcgctcatccgctcgggg
cgcttcgaccgcctcgtccaagtcggccagcccgacgtcgagggccgcgagcagattctg
aagattcacacccaggacatcccgctcgcgcccgacgtcagcctccgcgaacttgccgaa
gtcactgacggctacgtcggcagcgacctcgcgaacatcacccgcgaagccgccatcgaa
gcgctccgcgaggacgaagacgccgacgaagtcgagatgcgccacttccgccgcggcatg
gaggacgtccgccccaccgtcacggaagacctcatggactactacgaccgcgtcgaagaa
cagttcaagggcagtcagaaccccgagaccagccgcgagaagggcggccacatcgggttc
cagtag
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integrated database retrieval system
